RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SLC46A3Q7Z3Q1 461 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TECPR1Q7Z6L1 1165 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 KIAA0907Q7Z7F0 614 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ADCK1Q86TW2 530 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 NLRP8Q86W28 1048 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CADM3Q8N126 398 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 NAGSQ8N159 534 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 C1orf52Q8N6N3 182 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 FBXO15Q8NCQ5 510 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 C11orf65Q8NCR3 313 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 VPS37AQ8NEZ2 397 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 OR7G3Q8NG95 312 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 OR2A12Q8NGT7 310 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SKA2Q8WVK7 121 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SCAMP4Q969E2 229 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM169Q96HH4 297 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TPD52L3Q96J77 140 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 VPS35Q96QK1 796 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 INSM2Q96T92 566 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MTERF1Q99551 399 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 FEVQ99581 238 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 COPS4Q9BT78 406 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 MMP27Q9H306 513 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 PRO3102Q9H379 93 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 DSN1Q9H410 356 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM38AQ9H6F2 299 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 ZDHHC6Q9H6R6 413 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RASSF1Q9NS23 344 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 RAD18Q9NS91 495 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 KIF17Q9P2E2 1029 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CD84Q9UIB8 345 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 SLCO3A1Q9UIG8 710 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 VPS4AQ9UN37 437 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 UGT2A1Q9Y4X1 527 aa4.99□□□□□ -1.61
ATPAF1-212ENST00000542495 CEP290O15078 2479 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 HELZP42694 1942 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 TRIOBPQ9H2D6 2365 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 TMEM202A6NGA9 273 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CLCA1A8K7I4 914 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 TNFRSF11BO00300 401 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 FOXE1O00358 373 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ADAMDEC1O15204 470 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 MTX2O75431 263 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 VIPP01282 170 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CATP04040 527 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SRPRAP08240 638 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CYP2A6P11509 494 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 HLA-EP13747 358 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ANXA8P13928 327 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF8P17098 575 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CTSKP43235 329 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PRLHRP49683 370 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CTSCP53634 463 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CCL23P55773 120 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PCBP3P57721 371 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 IL1RL1Q01638 556 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 FCHO2Q0JRZ9 810 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PPIGQ13427 754 aaKnown RBP eCLIP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 NAE1Q13564 534 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 DGCR6Q14129 220 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 DMC1Q14565 340 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SF1Q15637 639 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 MICAQ29983 383 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CCSMST1Q4G0I0 132 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 FBXO43Q4G163 708 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 IFI44LQ53G44 452 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF385BQ569K4 471 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CRB2Q5IJ48 1285 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PERM1Q5SV97 790 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ADNP2Q6IQ32 1131 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 LILRA6Q6PI73 481 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 C19orf48Q6RUI8 117 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 Q6ZVL8 140 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PAGE2Q7Z2X7 111 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ZNF605Q86T29 641 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ADIPOR2Q86V24 386 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 CCDC103Q8IW40 242 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 LAS2Q8IYD9 372 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC5A8Q8N695 610 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 RASGEF1AQ8N9B8 481 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 DENND6BQ8NEG7 585 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 OR10G2Q8NGC3 310 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 OR52N2Q8NGI0 321 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 HUS1BQ8NHY5 278 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 MCFD2Q8NI22 146 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 BTN2A2Q8WVV5 523 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 AUTS2Q8WXX7 1259 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 GGHQ92820 318 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 MYDGFQ969H8 173 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 MAL2Q969L2 176 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 EAF1Q96JC9 268 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 DEFB118Q96PH6 123 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 KCNC2Q96PR1 638 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 PKP4Q99569 1192 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 ZSCAN5AQ9BUG6 496 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC46A2Q9BY10 475 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 DCSTAMPQ9H295 470 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 REEP4Q9H6H4 257 aa4.98□□□□□ -1.61
ATPAF1-212ENST00000542495 SP140LQ9H930 580 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms