RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SERPIND1P05546 499 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 GSTM2P28161 218 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 AHRP35869 848 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 SLC5A12Q1EHB4 618 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 SLC39A3Q9BRY0 314 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 GID8Q9NWU2 228 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 AHSPQ9NZD4 102 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 PCDHGA4Q9Y5G9 962 aa26.45■■□□□ 1.83
CCM2-218ENST00000541586 AKAP10O43572 662 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 PRMT3O60678 531 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 DKK1O94907 266 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 C9P02748 559 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 PGRP06401 933 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 PVRP15151 417 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 LSSP48449 732 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 CYP4F3Q08477 520 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 NFYCQ13952 458 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 FBXW8Q8N3Y1 598 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 MFSD9Q8NBP5 474 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 CDC26Q8NHZ8 85 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 SLC13A3Q8WWT9 602 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 CCDC74BQ96LY2 380 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 SORBS1Q9BX66 1292 aaKnown RBP26.45■■□□□ 1.82
CCM2-218ENST00000541586 DENND2DQ9H6A0 471 aaPredicted RBP26.45■■□□□ 1.82
CCM2-218ENST00000541586 SYNPO2LQ9H987 977 aa26.45■■□□□ 1.82
CCM2-218ENST00000541586 IGHV5-51A0A0C4DH38 117 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 FXYD1O00168 92 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 SORBS2O94875 1100 aaKnown RBP26.44■■□□□ 1.82
CCM2-218ENST00000541586 KLK1P06870 262 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 HNRNPH1P31943 449 aaKnown RBP26.44■■□□□ 1.82
CCM2-218ENST00000541586 ASMTP46597 345 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 MTTPP55157 894 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 ZIC1Q15915 447 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 CLPPQ16740 277 aaPredicted RBP26.44■■□□□ 1.82
CCM2-218ENST00000541586 FCRL6Q6DN72 434 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 DPP10Q8N608 796 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 LRRC58Q96CX6 371 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 GPATCH1Q9BRR8 931 aaKnown RBP26.44■■□□□ 1.82
CCM2-218ENST00000541586 ZNF717Q9BY31 904 aaPredicted RBP26.44■■□□□ 1.82
CCM2-218ENST00000541586 MCM8Q9UJA3 840 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 PACSIN3Q9UKS6 424 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 CLCA2Q9UQC9 943 aa26.44■■□□□ 1.82
CCM2-218ENST00000541586 MN1Q10571 1320 aaPredicted RBP26.44■■□□□ 1.82
CCM2-218ENST00000541586 TLCD2A6NGC4 264 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 SLC9B1P1A6NJY1 282 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 NDUFS4O43181 175 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 ID4P47928 161 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 C21orf58P58505 322 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 ZNF763Q0D2J5 394 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 HKDC1Q2TB90 917 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 TRMT5Q32P41 509 aaKnown RBP26.43■■□□□ 1.82
CCM2-218ENST00000541586 FBXW10Q5XX13 1052 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 FIGLAQ6QHK4 219 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 HPS6Q86YV9 775 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 SLITRK4Q8IW52 837 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 TRPV3Q8NET8 790 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 HOPXQ9BPY8 73 aaPredicted RBP26.43■■□□□ 1.82
CCM2-218ENST00000541586 C1GALT1Q9NS00 363 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 SLAMF8Q9P0V8 285 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 ANKMY1Q9P2S6 941 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 KLK4Q9Y5K2 254 aa26.43■■□□□ 1.82
CCM2-218ENST00000541586 A0A0J9YY10 115 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 LRIT2A6NDA9 550 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 RTCAO00442 366 aaKnown RBP26.42■■□□□ 1.82
CCM2-218ENST00000541586 MGRN1O60291 552 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 PRAMEF10O60809 474 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 KLHL18O94889 574 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 FKBP9O95302 570 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 STATHP02808 62 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 ST6GAL1P15907 406 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 HOXD11P31277 338 aaPredicted RBP26.42■■□□□ 1.82
CCM2-218ENST00000541586 RPS15AP62244 130 aaKnown RBP26.42■■□□□ 1.82
CCM2-218ENST00000541586 CAPRIN1Q14444 709 aaKnown RBP26.42■■□□□ 1.82
CCM2-218ENST00000541586 PIGGQ5H8A4 983 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 CDCP2Q5VXM1 449 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 WDR60Q8WVS4 1066 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 ZUFSPQ96AP4 578 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 CD180Q99467 661 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 CENPKQ9BS16 269 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 AICDAQ9GZX7 198 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 SPAG4Q9NPE6 437 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 ADA2Q9NZK5 511 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 FAM149AA5PLN7 773 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 CIB2O75838 187 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 S100A3P33764 101 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 BSGP35613 385 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 PDX1P52945 283 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 PHC1P78364 1004 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 ZFP36L1Q07352 338 aaKnown RBP26.42■■□□□ 1.82
CCM2-218ENST00000541586 HYAL2Q12891 473 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 UGT8Q16880 541 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 PGS1Q32NB8 556 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 FBXO42Q6P3S6 717 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 PUM2Q8TB72 1066 aaKnown RBP eCLIP26.42■■□□□ 1.82
CCM2-218ENST00000541586 RGMAQ96B86 450 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 FCRL4Q96PJ5 515 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 OR52E6Q96RD3 313 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 MACROD1Q9BQ69 325 aa26.42■■□□□ 1.82
CCM2-218ENST00000541586 REXO4Q9GZR2 422 aaKnown RBP26.42■■□□□ 1.82
CCM2-218ENST00000541586 TPP2P29144 1249 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms