RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 OR4C11Q6IEV9 310 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 PWWP2BQ6NUJ5 590 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 TMEM214Q6NUQ4 689 aaKnown RBP8.87□□□□□ -0.99
DDX55-208ENST00000541259 ABHD17CQ6PCB6 329 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 ZNF793Q6ZN11 406 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 RAB11FIP2Q7L804 512 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 ZFAND4Q86XD8 727 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 PDSS2Q86YH6 399 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 METTL4Q8N3J2 472 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 OR2L5Q8NG80 312 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 ACTRT2Q8TDY3 377 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 RGMAQ96B86 450 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 C11orf24Q96F05 449 aaPredicted RBP8.87□□□□□ -0.99
DDX55-208ENST00000541259 SLC45A3Q96JT2 553 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 MARK4Q96L34 752 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 PPP3R2Q96LZ3 170 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 C10orf90Q96M02 699 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 QRFPRQ96P65 431 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 TEFMQ96QE5 360 aaKnown RBP8.87□□□□□ -0.99
DDX55-208ENST00000541259 CCT7Q99832 543 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 RTKNQ9BST9 563 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 CCDC28BQ9BUN5 200 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 C1orf50Q9BV19 199 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 EBPLQ9BY08 206 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 NLNQ9BYT8 704 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 STRADBQ9C0K7 418 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 TCF7L2Q9NQB0 619 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 PFDN4Q9NQP4 134 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 RIC8BQ9NVN3 520 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 C1orf109Q9NX04 203 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 SERTAD3Q9UJW9 196 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 DLGAP4Q9Y2H0 992 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 LOXL2Q9Y4K0 774 aa8.87□□□□□ -0.99
DDX55-208ENST00000541259 POLR3HQ9Y535 204 aaPredicted RBP8.87□□□□□ -0.99
DDX55-208ENST00000541259 DCHS1Q96JQ0 3298 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 NUP210LQ5VU65 1888 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 A0A0A6YYC8 382 aaPredicted RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 ZNF860A6NHJ4 632 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 TMX2-CTNND1H3BSU7 103 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 I3L1I5 382 aaPredicted RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 J3QL48 77 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 TXNDC9O14530 226 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ZSCAN9O15535 394 aaPredicted RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 ZNF749O43361 778 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 FOXS1O43638 330 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 VPS4BO75351 444 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 SEMA3DO95025 777 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 FGF5P12034 268 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ALOX12P18054 663 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 IL1RNP18510 177 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 TACR1P25103 407 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ATP5A1P25705 553 aaKnown RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 TPP2P29144 1249 aaPredicted RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 RAP1GDS1P52306 607 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 MAPK10P53779 464 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 DIO3P55073 304 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 STXBP1P61764 594 aaKnown RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 OLR1P78380 273 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 BTN3A2P78410 334 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 EMX2Q04743 252 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ACSM2AQ08AH3 577 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 GRM7Q14831 915 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 DEFB134Q4QY38 66 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 TMEM35AQ53FP2 167 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 MANEAQ5SRI9 462 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 IL23RQ5VWK5 629 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ACSM2BQ68CK6 577 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 NOXRED1Q6NXP6 359 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 TTLL10Q6ZVT0 673 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ACAD11Q709F0 780 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 COMMD6Q7Z4G1 85 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 GPR135Q8IZ08 494 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 DEPDC4Q8N2C3 294 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 METTL27Q8N6F8 245 aaPredicted RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 TTC29Q8NA56 475 aaPredicted RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 FNDC5Q8NAU1 212 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 SLC38A9Q8NBW4 561 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 OR9A4Q8NGU2 314 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 OR8K5Q8NH50 307 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 CEP70Q8NHQ1 597 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 BCAS4Q8TDM0 211 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 NUDT8Q8WV74 236 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ADAMTS14Q8WXS8 1223 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 GAL3ST3Q96A11 431 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 FAM122AQ96E09 287 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 LIN37Q96GY3 246 aaPredicted RBP8.86□□□□□ -0.99
DDX55-208ENST00000541259 RILPQ96NA2 401 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 CATSPER2Q96P56 530 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 CMKLR1Q99788 373 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 SIKE1Q9BRV8 207 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 FANCEQ9HB96 536 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 FBXO8Q9NRD0 319 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 ENAMQ9NRM1 1142 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 NMRK1Q9NWW6 199 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 SLC39A1Q9NY26 324 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 HEY2Q9UBP5 337 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 BAIAP2L1Q9UHR4 511 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 RARRES3Q9UL19 164 aa8.86□□□□□ -0.99
DDX55-208ENST00000541259 NAALAD2Q9Y3Q0 740 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms