RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 NOL11Q9H8H0 719 aaKnown RBP15.91■□□□□ 0.14
CD9-209ENST00000540891 PRDM7Q9NQW5 492 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 C5AR2Q9P296 337 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 TSC22D4Q9Y3Q8 395 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 SPTA1P02549 2419 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 MAGEB17A8MXT2 336 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 FAM227AF5H4B4 570 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 UGDHO60701 494 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 TGFB1P01137 390 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 PCNAP12004 261 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 CASRP41180 1078 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 PIK3CGP48736 1102 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 CD97P48960 835 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 TRAF3Q13114 568 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 RASA2Q15283 850 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 ERCC6LQ2NKX8 1250 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 TRIM40Q6P9F5 258 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 ZNF793Q6ZN11 406 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 ATG14Q6ZNE5 492 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 RPS27LQ71UM5 84 aaKnown RBP15.9■□□□□ 0.14
CD9-209ENST00000540891 CPEB2Q7Z5Q1 589 aaKnown RBP15.9■□□□□ 0.14
CD9-209ENST00000540891 L3MBTL4Q8NA19 623 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 TEX19Q8NA77 164 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 OR2W6PQ8NHA6 318 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 HUS1BQ8NHY5 278 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 METTL21AQ8WXB1 218 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 THOC3Q96J01 351 aaKnown RBP15.9■□□□□ 0.14
CD9-209ENST00000540891 FAR2Q96K12 515 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 NPLQ9BXD5 320 aaPredicted RBP15.9■□□□□ 0.14
CD9-209ENST00000540891 C1QTNF3Q9BXJ4 246 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 LHPPQ9H008 270 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 ACTR8Q9H981 624 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 RIC8BQ9NVN3 520 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 G3BP2Q9UN86 482 aaKnown RBP15.9■□□□□ 0.14
CD9-209ENST00000540891 RNF11Q9Y3C5 154 aa15.9■□□□□ 0.14
CD9-209ENST00000540891 A0A1B0GTL3 188 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 SMIM23A6NLE4 172 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 H0YIV9 168 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 B4GALT2O60909 372 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 SH3BGRLO75368 114 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 PRR35P0CG20 571 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 RNH1P13489 461 aaKnown RBP15.89■□□□□ 0.13
CD9-209ENST00000540891 CERS1P27544 350 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 BTG2P78543 158 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 ABRAXAS2Q15018 415 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 IGFL3Q6UXB1 125 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 MYLK4Q86YV6 388 aaPredicted RBP15.89■□□□□ 0.13
CD9-209ENST00000540891 WDR20Q8TBZ3 569 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 ZNF483Q8TF39 744 aaPredicted RBP15.89■□□□□ 0.13
CD9-209ENST00000540891 PSMF1Q92530 271 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 NTMT1Q9BV86 223 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 PPCSQ9HAB8 311 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 DMRT3Q9NQL9 472 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 EMCNQ9ULC0 261 aa15.89■□□□□ 0.13
CD9-209ENST00000540891 DOCK10Q96BY6 2186 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 IGKV3D-11A0A0A0MRZ8 115 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 PYCARD-AS1I3L0S3 204 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 RTCAO00442 366 aaKnown RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 PPP6CO00743 305 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 DLX3O60479 287 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 DPM1O60762 260 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 SEC24DO94855 1032 aaPredicted RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 CLDN9O95484 217 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 SERPINA7P05543 415 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 GSTA1P08263 222 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 NUDT17P0C025 328 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 JAK1P23458 1154 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 SERPINB1P30740 379 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 HPDP32754 393 aaPredicted RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 PIK3CBP42338 1070 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 HNRNPFP52597 415 aaKnown RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 MTTPP55157 894 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 CDH13P55290 713 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 DDX39BQ13838 428 aaKnown RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 NSDHLQ15738 373 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 CPSF6Q16630 551 aaKnown RBP eCLIP15.88■□□□□ 0.13
CD9-209ENST00000540891 DEPDC1Q5TB30 811 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 KHDRBS2Q5VWX1 349 aaKnown RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 FAM219BQ5XKK7 198 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 IGFL2Q6UWQ7 119 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 QSOX2Q6ZRP7 698 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 HPS6Q86YV9 775 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 KBTBD2Q8IY47 623 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 CNPY4Q8N129 248 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 Q8NA96 180 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 TMEM52Q8NDY8 209 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 KCNC2Q96PR1 638 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 SERINC2Q96SA4 455 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 MTERF1Q99551 399 aaKnown RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 TUBB6Q9BUF5 446 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 TRIM4Q9C037 500 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 OR51B5Q9H339 312 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 SEMA4BQ9NPR2 832 aaPredicted RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 NECTIN3Q9NQS3 549 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 C19orf25Q9UFG5 118 aaPredicted RBP15.88■□□□□ 0.13
CD9-209ENST00000540891 PCDHGA11Q9Y5H2 935 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 CLDN16Q9Y5I7 305 aa15.88■□□□□ 0.13
CD9-209ENST00000540891 SAP18O00422 153 aaKnown RBP15.87■□□□□ 0.13
CD9-209ENST00000540891 B3GALT2O43825 422 aa15.87■□□□□ 0.13
CD9-209ENST00000540891 KLHL41O60662 606 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms