RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FOXO6A8MYZ6 492 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 DNALI1O14645 258 aaPredicted RBP11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 ZNHIT1O43257 154 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 NRDCO43847 1150 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 HS6ST1O60243 411 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 ITGA10O75578 1167 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TPOP07202 933 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 IGFBP2P18065 325 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 GSTM2P28161 218 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 HNF4AP41235 474 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 HSD17B7P56937 341 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 STXBP1P61764 594 aaKnown RBP11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 RBBP5Q15291 538 aaKnown RBP11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 CMPK2Q5EBM0 449 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TEDDM1Q5T9Z0 273 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 ARHGAP11AQ6P4F7 1023 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 C3P1Q6ZMU1 363 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TMPRSS11BQ86T26 416 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 CD163Q86VB7 1156 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 THOC6Q86W42 341 aaKnown RBP11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 SCUBE1Q8IWY4 988 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TMEM156Q8N614 296 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TTLQ8NG68 377 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 CREB3L4Q8TEY5 395 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 GAL3ST3Q96A11 431 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 VMP1Q96GC9 406 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 SEC16BQ96JE7 1060 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TSNARE1Q96NA8 513 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TP63Q9H3D4 680 aaPredicted RBP11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 KLHL31Q9H511 634 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 TIMMDC1Q9NPL8 285 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 SLC22A14Q9Y267 594 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 PPP2R2CQ9Y2T4 447 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 YARS2Q9Y2Z4 477 aaKnown RBP11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 POLQO75417 2590 aa11.2□□□□□ -0.62
CBX3P4-202ENST00000540428 CCDC168Q8NDH2 2452 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 C2CD3Q4AC94 2353 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 ADGRG4Q8IZF6 3080 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 A0A088AWK7 358 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CTAGE15A4D2H0 777 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 USP27XA6NNY8 438 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 A8MUA0 341 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CLDN4O14493 209 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 MYO1DO94832 1006 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 ZNF37AP17032 561 aaPredicted RBP11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 ZNF10P21506 573 aaPredicted RBP11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CHRNB4P30926 498 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 HNMTP50135 292 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 SSR4P51571 173 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 GPR143P51810 404 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CCZ1BP86790 482 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CCZ1P86791 482 aaPredicted RBP11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 PPP1R7Q15435 360 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 TOR1AIP1Q5JTV8 583 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 PAOXQ6QHF9 649 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CTAGE6Q86UF2 777 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 MARVELD2Q8N4S9 558 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 NKAPQ8N5F7 415 aaKnown RBP11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 SLCO2A1Q92959 643 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 LRRC39Q96DD0 335 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 PDLIM2Q96JY6 352 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 FAR2Q96K12 515 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CCDC77Q9BR77 488 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 RHBGQ9H310 441 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 PPANQ9NQ55 473 aaKnown RBP11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 ASIC3Q9UHC3 531 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 ZNF223Q9UK11 482 aaPredicted RBP11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 FBXW2Q9UKT8 454 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CLDN16Q9Y5I7 305 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 CACNA1CQ13936 2221 aa11.19□□□□□ -0.62
CBX3P4-202ENST00000540428 C4orf51C9J302 202 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 CES2O00748 559 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 CDC40O60508 579 aaKnown RBP eCLIP11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 H2AFYO75367 372 aaKnown RBP11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 BANF1O75531 89 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 ZFAND5O76080 213 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 TUBB4AP04350 444 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 GNAZP19086 355 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 HPDP32754 393 aaPredicted RBP11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 RAB38P57729 211 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 BTN3A2P78410 334 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 TFF3Q07654 80 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 FRG1Q14331 258 aaKnown RBP11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 RGS9BPQ6ZS82 235 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 MDGA2Q7Z553 956 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 IGDCC3Q8IVU1 814 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 ZNF595Q8IYB9 648 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 KLHDC8AQ8IYD2 350 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 PSD4Q8NDX1 1056 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 LILRB4Q8NHJ6 448 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 RND1Q92730 232 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 NCLNQ969V3 563 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 OSBPL9Q96SU4 736 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 CAPS2Q9BXY5 557 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 PITHD1Q9GZP4 211 aaPredicted RBP11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 AICDAQ9GZX7 198 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 NT5DC2Q9H857 520 aa11.18□□□□□ -0.62
CBX3P4-202ENST00000540428 PLAC1Q9HBJ0 212 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms