RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, human

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561A3-215	ENST00000540317	FOLH1	Q04609	750 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	TSTA3	Q13630	321 aa	Predicted RBP	11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ENPP7	Q6UWV6	458 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	C17orf64	Q86WR6	236 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PHACTR4	Q8IZ21	702 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	TSACC	Q96A04	125 aa	Predicted RBP	11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SCARF2	Q96GP6	870 aa	Predicted RBP	11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CENPN	Q96H22	339 aa	Predicted RBP	11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ZNF583	Q96ND8	569 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	MVB12B	Q9H7P6	319 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	NT5DC2	Q9H857	520 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SERHL	Q9NQF3	203 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	DMRT3	Q9NQL9	472 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	AHSP	Q9NZD4	102 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	DOLK	Q9UPQ8	538 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	AURKC	Q9UQB9	309 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PRKAB1	Q9Y478	270 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PCDHB14	Q9Y5E9	798 aa		11.43	□□□□□ -0.58
CYB561A3-215	ENST00000540317	COL5A1	P20908	1838 aa	Predicted RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ELOVL7	A1L3X0	281 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CPED1	A4D0V7	1026 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	TAF4	O00268	1085 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SCAMP2	O15127	329 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ANXA4	P09525	319 aa	Predicted RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CDH1	P12830	882 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	IDS	P22304	550 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PPIB	P23284	216 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	HRH2	P25021	359 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	BLK	P51451	505 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CLCNKA	P51800	687 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	OR4D2	P58180	307 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	RPS13	P62277	151 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	YBX1	P67809	324 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ABHD18	Q0P651	414 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CAMK2B	Q13554	666 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	TCEA2	Q15560	299 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	FAM98B	Q52LJ0	330 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CATSPERE	Q5SY80	951 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	INTS11	Q5TA45	600 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	TMIGD1	Q6UXZ0	262 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	MICU2	Q8IYU8	434 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	C1orf52	Q8N6N3	182 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	FAM181A	Q8N9Y4	354 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SH3KBP1	Q96B97	665 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	AIF1L	Q9BQI0	150 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	C9orf16	Q9BUW7	83 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	UGT2B28	Q9BY64	529 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	KAT8	Q9H7Z6	458 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	WASH6P	Q9NQA3	447 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	AGPAT4	Q9NRZ5	378 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ATAD3A	Q9NVI7	634 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SLC25A37	Q9NYZ2	338 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	GMPR2	Q9P2T1	348 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CIDEB	Q9UHD4	219 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	BTNL2	Q9UIR0	455 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CORO2B	Q9UQ03	480 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CLCA2	Q9UQC9	943 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	WBP11	Q9Y2W2	641 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	TDRKH	Q9Y2W6	561 aa	Known RBP	11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	HEBP2	Q9Y5Z4	205 aa		11.42	□□□□□ -0.58
CYB561A3-215	ENST00000540317	GNG14	A0A1W2PPG7	69 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PCDH7	O60245	1069 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	TIPRL	O75663	272 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CEACAM5	P06731	702 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PIM1	P11309	404 aa	Predicted RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	MTHFD1	P11586	935 aa	Known RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ZNF26	P17031	533 aa	Predicted RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	HOXB9	P17482	250 aa	Predicted RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	DDX5	P17844	614 aa	Known RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	IL1RN	P18510	177 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CCR8	P51685	355 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	KIAA1024L	P59773	190 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PHC1	P78364	1004 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	RAE1	P78406	368 aa	Known RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	INSM1	Q01101	510 aa	Predicted RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ZNF763	Q0D2J5	394 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SELPLG	Q14242	412 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PYCR3	Q53H96	274 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CPTP	Q5TA50	214 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	PPP4R4	Q6NUP7	873 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CHST15	Q7LFX5	561 aa	Predicted RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	CALHM3	Q86XJ0	350 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	FAM129C	Q86XR2	697 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	MSRB3	Q8IXL7	192 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	MARVELD2	Q8N4S9	558 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ABHD11	Q8NFV4	315 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	OR10A6	Q8NH74	314 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	COQ8B	Q96D53	544 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	MTERF3	Q96E29	417 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	FAM120B	Q96EK7	910 aa	Known RBP	11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	EGLN2	Q96KS0	407 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	ZNF597	Q96LX8	424 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	LRRC61	Q9BV99	259 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	SPATA9	Q9BWV2	254 aa		11.41	□□□□□ -0.58
CYB561A3-215	ENST00000540317	OSBPL11	Q9BXB4	747 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms