RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 IL10RAQ13651 578 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 ERV3-1Q14264 604 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 ATP1A1-AS1Q5TC04 95 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 HHATQ5VTY9 493 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 KHDRBS2Q5VWX1 349 aaKnown RBP12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 CES4AQ5XG92 561 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 TRIM40Q6P9F5 258 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 ABHD17CQ6PCB6 329 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 INO80CQ6PI98 192 aaPredicted RBP12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 ATG14Q6ZNE5 492 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 CHSY3Q70JA7 882 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 PRSS58Q8IYP2 241 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 ZSCAN1Q8NBB4 408 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 OR6Y1Q8NGX8 325 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 OR51Q1Q8NH59 317 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 STT3BQ8TCJ2 826 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 SELENOMQ8WWX9 145 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 SREK1Q8WXA9 508 aaKnown RBP12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 MIEF2Q96C03 454 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 FAR2Q96K12 515 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 SPSB2Q99619 263 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 SORBS1Q9BX66 1292 aaKnown RBP12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 SLC29A3Q9BZD2 475 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 FAM117AQ9C073 453 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 MKKSQ9NPJ1 570 aaPredicted RBP12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 PRDM7Q9NQW5 492 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 PSD3Q9NYI0 1048 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 PADI2Q9Y2J8 665 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 PCSK5Q92824 1860 aa12.03□□□□□ -0.48
TSPAN9-207ENST00000539631 H3BQF6 201 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 CHST10O43529 356 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 KRT6AP02538 564 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 KRT6BP04259 564 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 UMODP07911 640 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 PRKAR1AP10644 381 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 CERS1P27544 350 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 SERPINB3P29508 390 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 ARRB2P32121 409 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 FOLR3P41439 243 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 KRT6CP48668 564 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 RAP1GDS1P52306 607 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 SLC18A1P54219 525 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 SKP1P63208 163 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 TGM3Q08188 693 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 RUNX2Q13950 521 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 RCN2Q14257 317 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 CHI3L2Q15782 390 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 TMEM35AQ53FP2 167 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 ARL13AQ5H913 290 aaPredicted RBP12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 NIPAL1Q6NVV3 410 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 SCIMPQ6UWF3 145 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 ZNF793Q6ZN11 406 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 CUZD1Q86UP6 607 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 LAPTM4BQ86VI4 370 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 ZC3H7AQ8IWR0 971 aaKnown RBP12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 CA13Q8N1Q1 262 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 GOLGA6L1Q8N7Z2 621 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 OR2Y1Q8NGV0 311 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 PEX11GQ96HA9 241 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 HBEGFQ99075 208 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 SERPINI1Q99574 410 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 TRMOQ9BU70 441 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 TGIF2Q9GZN2 237 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 WDR54Q9H977 334 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 COPS7BQ9H9Q2 264 aaPredicted RBP12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 PPT2Q9UMR5 302 aa12.02□□□□□ -0.49
TSPAN9-207ENST00000539631 CEP295Q9C0D2 2601 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 SEC16AO15027 2179 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 CDC14CA4D256 554 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 HMGB1P1B2RPK0 211 aaPredicted RBP12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 PLPP1O14494 284 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 JRKO75564 520 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 CRCPO75575 148 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 BMP10O95393 424 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 NEFHP12036 1026 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 CHN1P15882 459 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 BGNP21810 368 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 ATP5A1P25705 553 aaKnown RBP12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 OTX2P32243 289 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 XCR1P46094 333 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 MTTPP55157 894 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 MC1RQ01726 317 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 KLC1Q07866 573 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 CDC20Q12834 499 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 CUL3Q13618 768 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 ABRAXAS2Q15018 415 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 UGT8Q16880 541 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 C10orf62Q5T681 223 aaPredicted RBP12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 CLEC6AQ6EIG7 209 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 OR4C11Q6IEV9 310 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 PPP1R14CQ8TAE6 165 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 RGMAQ96B86 450 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 KCNC2Q96PR1 638 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 SERINC2Q96SA4 455 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 TBCDQ9BTW9 1192 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 RBCK1Q9BYM8 510 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
TSPAN9-207ENST00000539631 PRORYQ9H606 182 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms