RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 OARD1Q9Y530 152 aa11.7□□□□□ -0.54
VAMP1-206ENST00000538970 FAM95CA0A1B0GW59 222 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 C19orf84I3L1E1 186 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 FCHO1O14526 889 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 TP73O15350 636 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ZNHIT1O43257 154 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ZSCAN12O43309 604 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 CLDN14O95500 239 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ABOP16442 354 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 TCP1P17987 556 aaKnown RBP11.69□□□□□ -0.54
VAMP1-206ENST00000538970 SLC6A12P48065 614 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 HNMTP50135 292 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 HLCSP50747 726 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ARL4CP56559 192 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 TAS2R39P59534 338 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 DR1Q01658 176 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 MGAT5Q09328 741 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 TERF2Q15554 542 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 SYDE1Q6ZW31 735 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-206ENST00000538970 FGD2Q7Z6J4 655 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ADAMTSL2Q86TH1 951 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ANKMY2Q8IV38 441 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 SCUBE1Q8IWY4 988 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 KLHL7Q8IXQ5 586 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.69□□□□□ -0.54
VAMP1-206ENST00000538970 KLHDC8AQ8IYD2 350 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 APCDD1LQ8NCL9 501 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 B3GNT7Q8NFL0 401 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 AGAP11Q8TF27 550 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 PHF10Q8WUB8 498 aaKnown RBP11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ANKRD49Q8WVL7 239 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 GAL3ST3Q96A11 431 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 EGFL8Q99944 293 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 DEFB126Q9BYW3 111 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 MMACHCQ9Y4U1 282 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 ASB1Q9Y576 335 aa11.69□□□□□ -0.54
VAMP1-206ENST00000538970 NCOA6Q14686 2063 aaPredicted RBP11.69□□□□□ -0.54
VAMP1-206ENST00000538970 DCHS2Q6V1P9 2916 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 MYO7BQ6PIF6 2116 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 TRBV11-1A0A0K0K1C0 115 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 A8MUA0 341 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 ADAM10O14672 748 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 MYO1DO94832 1006 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 WDR47O94967 919 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 SEC31AO94979 1220 aaKnown RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 GNAZP19086 355 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 GDF5P43026 501 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 CLCN2P51788 898 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 STXBP1P61764 594 aaKnown RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 BTN3A2P78410 334 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 SLBPQ14493 270 aaKnown RBP eCLIP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 FASTKD3Q14CZ7 662 aaKnown RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 TSNQ15631 228 aaKnown RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 C18orf21Q32NC0 220 aaPredicted RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 SLCO4C1Q6ZQN7 724 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 FRA10AC1Q70Z53 315 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 DOLPP1Q86YN1 238 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 CEP97Q8IW35 865 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 POGLUT1Q8NBL1 392 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 FBXO36Q8NEA4 188 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 TMEM125Q96AQ2 219 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 RHBDF1Q96CC6 855 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 MTFMTQ96DP5 389 aaKnown RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 DMRTA2Q96SC8 542 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 MCMBPQ9BTE3 642 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 POPDC3Q9HBV1 291 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 GPAMQ9HCL2 828 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 MOCS1Q9NZB8 636 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 CTNNAL1Q9UBT7 734 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 ZNF223Q9UK11 482 aaPredicted RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 PPIEQ9UNP9 301 aaKnown RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 KLF13Q9Y2Y9 288 aaPredicted RBP11.68□□□□□ -0.54
VAMP1-206ENST00000538970 CLDN16Q9Y5I7 305 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 TACC2O95359 2948 aa11.68□□□□□ -0.54
VAMP1-206ENST00000538970 MED13LQ71F56 2210 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 A0A0G2JN53 185 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 E7ESA3 106 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 E9PLN8 166 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 TGFBR3LH3BV60 316 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 ERI3O43414 337 aaKnown RBP11.67□□□□□ -0.54
VAMP1-206ENST00000538970 C1GALT1C1LP0DN25 315 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 GSTM2P28161 218 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 PPP2R1BP30154 601 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 HNRNPH1P31943 449 aaKnown RBP11.67□□□□□ -0.54
VAMP1-206ENST00000538970 PTGER1P34995 402 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 MEOX1P50221 254 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 HNRNPFP52597 415 aaKnown RBP11.67□□□□□ -0.54
VAMP1-206ENST00000538970 HSD17B7P56937 341 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 PDIA2Q13087 525 aaKnown RBP11.67□□□□□ -0.54
VAMP1-206ENST00000538970 RUNX2Q13950 521 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 TMIGD1Q6UXZ0 262 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 C3P1Q6ZMU1 363 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 CREG2Q8IUH2 290 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 SULF2Q8IWU5 870 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 CYP4Z2PQ8N1L4 340 aa11.67□□□□□ -0.54
VAMP1-206ENST00000538970 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms