RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TXLNGQ9NUQ3 528 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 AHSPQ9NZD4 102 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 POLR3HQ9Y535 204 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-202ENST00000538838 C9orf172C9J069 976 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 DSCR3O14972 297 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 GALR3O60755 368 aaPredicted RBP22.29■■□□□ 1.16
TMEM260-202ENST00000538838 VPS4BO75351 444 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 TNFSF15O95150 251 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 ALAS2P22557 587 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 RAE1P78406 368 aaKnown RBP22.29■■□□□ 1.16
TMEM260-202ENST00000538838 FAM53BQ14153 422 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 C1orf189Q5VU69 101 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 RHBDD2Q6NTF9 364 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 ACAD11Q709F0 780 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 SPATA21Q7Z572 469 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 NUDT13Q86X67 352 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 FNDC5Q8NAU1 212 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 SLC38A9Q8NBW4 561 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 CLIP3Q96DZ5 547 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 C11orf24Q96F05 449 aaPredicted RBP22.29■■□□□ 1.16
TMEM260-202ENST00000538838 ULBP3Q9BZM4 244 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 POLR1BQ9H9Y6 1135 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 TCF7L2Q9NQB0 619 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 PCDHGA8Q9Y5G5 932 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 WDFY3Q8IZQ1 3526 aa22.29■■□□□ 1.16
TMEM260-202ENST00000538838 A0A1B0GX78 115 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 SGK494L7N484 410 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 KIAA0754O94854 1291 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 KLK1P06870 262 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ATXN8OSP0DMR3 200 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 HIST1H1TP22492 207 aaPredicted RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ATP5A1P25705 553 aaKnown RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ID4P47928 161 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ARFIP1P53367 373 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 LSM12Q3MHD2 195 aaKnown RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ACTRT2Q8TDY3 377 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 C10orf82Q8WW14 230 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 FOXJ2Q9P0K8 574 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 PCDH7O60245 1069 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 CPNE3O75131 537 aaKnown RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 RDH16O75452 317 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 NSA2O95478 260 aaKnown RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 LBPP18428 481 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 TPP2P29144 1249 aaPredicted RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 TIA1P31483 386 aaKnown RBP eCLIP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ARFIP2P53365 341 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 MTTPP55157 894 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 OLR1P78380 273 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 SDK2Q58EX2 2172 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ACOT4Q8N9L9 421 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 MMABQ96EY8 250 aaPredicted RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 CCT8L2Q96SF2 557 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ZPBPQ9BS86 351 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 ASPSCR1Q9BZE9 553 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 DDX31Q9H8H2 851 aaKnown RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 KLK13Q9UKR3 277 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 DLGAP4Q9Y2H0 992 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 TMEM184BQ9Y519 407 aaPredicted RBP22.28■■□□□ 1.16
TMEM260-202ENST00000538838 PCDHGA3Q9Y5H0 932 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 MAU2Q9Y6X3 613 aa22.28■■□□□ 1.16
TMEM260-202ENST00000538838 SPTBN2O15020 2390 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 A0A088AWK7 358 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 A0A0A6YYD5 115 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 E9PBE3 544 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 SNX3O60493 162 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 KLHL41O60662 606 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 SCELO95171 688 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 HBQ1P09105 142 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 ITGAXP20702 1163 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 ZNF10P21506 573 aaPredicted RBP22.27■■□□□ 1.16
TMEM260-202ENST00000538838 TSFMP43897 325 aaKnown RBP22.27■■□□□ 1.16
TMEM260-202ENST00000538838 ERVK-8P63133 956 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 TMEM198Q66K66 360 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 NOXRED1Q6NXP6 359 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 PAGE2Q7Z2X7 111 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 SHISA5Q8N114 240 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 OR5T3Q8NGG3 340 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 CEP70Q8NHQ1 597 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.27■■□□□ 1.16
TMEM260-202ENST00000538838 MVB12AQ96EY5 273 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 METTL2AQ96IZ6 378 aaKnown RBP22.27■■□□□ 1.16
TMEM260-202ENST00000538838 MARK4Q96L34 752 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 FCRL1Q96LA6 429 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 SERINC2Q96SA4 455 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 ROGDIQ9GZN7 287 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 TMED5Q9Y3A6 229 aa22.27■■□□□ 1.16
TMEM260-202ENST00000538838 TMPRSS11DO60235 418 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 DNAJB6O75190 326 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 ALDOCP09972 364 aaKnown RBP22.26■■□□□ 1.15
TMEM260-202ENST00000538838 OR1D4P47884 311 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 AVPR1BP47901 424 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 OGFOD2Q6N063 350 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 GALNT18Q6P9A2 607 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 RIPOR1Q6ZS17 1223 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 STON2Q8WXE9 905 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 RILPQ96NA2 401 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 GBP5Q96PP8 586 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 CCDC28BQ9BUN5 200 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 SIRT5Q9NXA8 310 aa22.26■■□□□ 1.15
TMEM260-202ENST00000538838 HCN3Q9P1Z3 774 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms