RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 MRPS33Q9Y291 106 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MMACHCQ9Y4U1 282 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZFHX3Q15911 3703 aa12.11□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SYNDIG1LA6NDD5 238 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 FIGNL2A6NMB9 653 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CLDN4O14493 209 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MSX1P28360 303 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 STXBP1P61764 594 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 REEP5Q00765 189 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CRYMQ14894 314 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TOR1AIP1Q5JTV8 583 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CCDC137Q6PK04 289 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZNF227Q86WZ6 799 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GPALPP1Q8IXQ4 340 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZFP62Q8NB50 900 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ACBD4Q8NC06 268 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PSD4Q8NDX1 1056 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 OR4K1Q8NGD4 311 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 OR56A3Q8NH54 315 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 LILRB4Q8NHJ6 448 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 C16orf52Q8NHV5 167 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CREB3L4Q8TEY5 395 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ASB15Q8WXK1 588 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CCT6BQ92526 530 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NEIL2Q969S2 332 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 FBXL8Q96CD0 374 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PDLIM2Q96JY6 352 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NAP1L3Q99457 506 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 EGFL8Q99944 293 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TREX2Q9BQ50 279 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 DEFB127Q9H1M4 99 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PELI2Q9HAT8 420 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NECTIN3Q9NQS3 549 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 KCMF1Q9P0J7 381 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 KCNN3Q9UGI6 736 aa12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 YARS2Q9Y2Z4 477 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-207ENST00000535958 IGKV3D-11A0A0A0MRZ8 115 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NPIPA2E9PIF3 369 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NPIPA3F8WFD2 350 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 ZFAND5O76080 213 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 TTC4O95801 387 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 HPDP32754 393 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PMPCAQ10713 525 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SLC13A2Q13183 592 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RCN2Q14257 317 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RBM20Q5T481 1227 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 RGS9BPQ6ZS82 235 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GK5Q6ZS86 529 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 KIAA0408Q6ZU52 694 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 FRA10AC1Q70Z53 315 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SLC22A16Q86VW1 577 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PPIL6Q8IXY8 311 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CA13Q8N1Q1 262 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 MARVELD2Q8N4S9 558 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 CHDHQ8NE62 594 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NFAM1Q8NET5 270 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 OR52N2Q8NGI0 321 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 NCLNQ969V3 563 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 SEC16BQ96JE7 1060 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 UCK2Q9BZX2 261 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 PRTFDC1Q9NRG1 225 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 KCNE2Q9Y6J6 123 aa12.09□□□□□ -0.47
TNFRSF1A-207ENST00000535958 GOLGA6L10A0A0M3HER8 536 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 FAM166BA8MTA8 275 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 BCKDKO14874 412 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 DNAJB6O75190 326 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 IFNA16P05015 189 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SERPINA6P08185 405 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 IGFBP2P18065 325 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MAGEA3P43357 314 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 CDKN2DP55273 166 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 NUP107P57740 925 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PPIAP62937 165 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PPP2R2AP63151 447 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 BTN3A2P78410 334 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 BMPR2Q13873 1038 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 PPP1R7Q15435 360 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 KRTAP21-3Q3LHN1 58 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 BBS9Q3SYG4 887 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SPANXN3Q5MJ09 141 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 FAM45BPQ6NSW5 357 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ZNF585AQ6P3V2 769 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 TTC27Q6P3X3 843 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 IL20RBQ6UXL0 311 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 MDGA2Q7Z553 956 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 THOC6Q86W42 341 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 CCDC71Q8IV32 467 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 DMRTC2Q8IXT2 367 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 ARMC10Q8N2F6 343 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 APCDD1LQ8NCL9 501 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 TTLQ8NG68 377 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 GAL3ST3Q96A11 431 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SIGLEC10Q96LC7 697 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 OR4K3Q96R72 315 aa12.08□□□□□ -0.48
TNFRSF1A-207ENST00000535958 SMC6Q96SB8 1091 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms