RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZNF225Q9UK10 706 aa21.45■■□□□ 1.02
SFSWAP-204ENST00000535399 CCDC151A5D8V7 595 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 OR2W5A6NFC9 320 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 MASP2O00187 686 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 CYC1P08574 325 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 ARL1P40616 181 aaPredicted RBP21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 RRADP55042 308 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 DEPDC1Q5TB30 811 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 TMEM205Q6UW68 189 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 CA13Q8N1Q1 262 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 RDH11Q8TC12 318 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 PPP4R1Q8TF05 950 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 TBC1D20Q96BZ9 403 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 C8orf44Q96CB5 159 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 CCDC126Q96EE4 140 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 ZIM3Q96PE6 472 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 MTERF1Q99551 399 aaKnown RBP21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 NPLQ9BXD5 320 aaPredicted RBP21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 OR51B5Q9H339 312 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 PRDM7Q9NQW5 492 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 PLLPQ9Y342 182 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 SCN3AQ9NY46 2000 aa21.44■■□□□ 1.02
SFSWAP-204ENST00000535399 LOC102723996A0A087X1L8 192 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 A0A1W2PQ72 361 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 ALOX12BO75342 701 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 SH3BGRLO75368 114 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 CEACAM4O75871 244 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 FHP07954 510 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 SFTPCP11686 197 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 CPA3P15088 417 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 CCL11P51671 97 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 NEK2P51955 445 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 RPS13P62277 151 aaKnown RBP21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 TGM3Q08188 693 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 MINDY4Q4G0A6 757 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 BEND6Q5SZJ8 279 aaPredicted RBP21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 KHDRBS2Q5VWX1 349 aaKnown RBP21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 FAAH2Q6GMR7 532 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 CHSY3Q70JA7 882 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 SRFBP1Q8NEF9 429 aaKnown RBP21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 ABHD17AQ96GS6 310 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 KCNC2Q96PR1 638 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 ZNF382Q96SR6 550 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 GSTO2Q9H4Y5 243 aa21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 TLN1Q9Y490 2541 aaKnown RBP21.43■■□□□ 1.02
SFSWAP-204ENST00000535399 A0A088AWK7 358 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 MAGEB17A8MXT2 336 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 FOXE1O00358 373 aaPredicted RBP21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 PCDH17O14917 1159 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 B3GALT2O43825 422 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 ERLIN1O75477 346 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 RNH1P13489 461 aaKnown RBP21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 ACPPP15309 386 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 CREB1P16220 341 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 ZNF10P21506 573 aaPredicted RBP21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 MTTPP55157 894 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 DNAJB13P59910 316 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 RHAGQ02094 409 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 TUBB8Q3ZCM7 444 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 MFSD4BQ5TF39 518 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 FRG2Q64ET8 278 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 ZNF793Q6ZN11 406 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 CCDC63Q8NA47 563 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 FRG2BQ96QU4 278 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 SERINC2Q96SA4 455 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 PRM3Q9NNZ6 103 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 PSD3Q9NYI0 1048 aa21.42■■□□□ 1.02
SFSWAP-204ENST00000535399 MED13Q9UHV7 2174 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 FAM227AF5H4B4 570 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 MKRN2OSH3BPM6 223 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 SAP18O00422 153 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 RTCAO00442 366 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 RGS16O15492 202 aaPredicted RBP21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 SPAG7O75391 227 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 CDC123O75794 336 aaPredicted RBP21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 SCELO95171 688 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 MLYCDO95822 493 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 C8orf89P0DMQ9 161 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 COX6A1P12074 109 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 ATP5A1P25705 553 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 CERS1P27544 350 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 PHEXP78562 749 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 CEP85LQ5SZL2 805 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 FAM219BQ5XKK7 198 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 LRIG3Q6UXM1 1119 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 PLPP5Q8NEB5 264 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 MYRIPQ8NFW9 859 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 VPS50Q96JG6 964 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 MAGEB10Q96LZ2 347 aaPredicted RBP21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 SMC6Q96SB8 1091 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 TBCDQ9BTW9 1192 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 OXSMQ9NWU1 459 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 TRPS1Q9UHF7 1281 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 MID2Q9UJV3 735 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 PPT2Q9UMR5 302 aa21.41■■□□□ 1.02
SFSWAP-204ENST00000535399 A6NL46 340 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 B4GALT2O60909 372 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 OR4F21O95013 312 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 ETHE1O95571 254 aa21.4■■□□□ 1.02
SFSWAP-204ENST00000535399 HPP00738 406 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms