RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ADAM15Q13444 863 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 OLIG2Q13516 323 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 REEP3Q6NUK4 255 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 SNX29P2Q8IUI4 249 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 SLCO2A1Q92959 643 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 DEFB126Q9BYW3 111 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 BCAS3Q9H6U6 928 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 ZDHHC18Q9NUE0 388 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 PARPBPQ9NWS1 579 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 B4GALT7Q9UBV7 327 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 LOC100509620A0A075B734 347 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF860A6NHJ4 632 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 BLMHQ13867 455 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 CDK10Q15131 360 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 SEC23BQ15437 767 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 ASPGQ86U10 573 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 KBTBD6Q86V97 674 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC22A8Q8TCC7 542 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 KCNJ9Q92806 393 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 YTHDF1Q9BYJ9 559 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 DPAGT1Q9H3H5 408 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 PTTG2Q9NZH5 202 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 STOX2Q9P2F5 926 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 HCN2Q9UL51 889 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 A0A1W2PP18 115 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 WDR4P57081 412 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 CYBRD1Q53TN4 286 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF783Q6ZMS7 281 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 DENND6BQ8NEG7 585 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 SHKBP1Q8TBC3 707 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 THRSPQ92748 146 aa17.54■□□□□ 0.4
SFSWAP-203ENST00000535236 A0A1W2PP55 124 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 VNN2O95498 520 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 BCKDHAP12694 445 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 UQCRC2P22695 453 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 ETV3P41162 512 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 ZNF84P51523 738 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 TAMM41Q96BW9 452 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 TMEM80Q96HE8 168 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 DCSTAMPQ9H295 470 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 REEP4Q9H6H4 257 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 DISC1C4P0D8 188 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 C2CD4AQ8NCU7 369 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 RFT1Q96AA3 541 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 BARD1Q99728 777 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 IRF2BPLQ9H1B7 796 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 OR5K4A6NMS3 321 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 GPR89AB7ZAQ6 455 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 DUX1O43812 170 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 RNGTTO60942 597 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 CDC123O75794 336 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 DIRAS1O95057 198 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 GPR89BP0CG08 455 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 ENTPD1P49961 510 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 LRP8Q14114 963 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 DSG2Q14126 1118 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 ACSBG2Q5FVE4 666 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 ZDHHC14Q8IZN3 488 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC7A8Q9UHI5 535 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 HCRTR2O43614 444 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 TSPAN6O43657 245 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 EIF5AL1Q6IS14 154 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 GRPEL2Q8TAA5 225 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 BBS10Q8TAM1 723 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 KCNA7Q96RP8 456 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 RMI1Q9H9A7 625 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 OR6C74A6NCV1 312 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 MT-ND5P03915 603 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 HRH2P25021 359 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 PPP1R8Q12972 351 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 OR6N2Q8NGY6 317 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 NSMAFQ92636 917 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 POPDC3Q9HBV1 291 aa17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 FARSAQ9Y285 508 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-203ENST00000535236 C13orf42A0A1B0GVH6 325 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 ASGR2P07307 311 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 EPCAMP16422 314 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 INCA1Q0VD86 236 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 C3orf33Q6P1S2 294 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 C1orf74Q96LT6 269 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 GPR174Q9BXC1 333 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 MOV10Q9HCE1 1003 aaKnown RBP17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 HPF1Q9NWY4 346 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 ACTR3BQ9P1U1 418 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 ERVK-18Q9QC07 812 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 RHCGQ9UBD6 479 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 MGAT4BQ9UQ53 548 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 PCDHGB6Q9Y5F9 930 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 E2F3O00716 465 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 PTPRCAPQ14761 206 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 SLC35F1Q5T1Q4 408 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 OGFRL1Q5TC84 451 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 EPGNQ6UW88 154 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 TMPPEQ6ZT21 453 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 TMED4Q7Z7H5 227 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 TRAM1L1Q8N609 369 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 GATSQ8NAP1 163 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 RAB8BQ92930 207 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms