RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NPIPA5E9PKD4 350 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CLDN4O14493 209 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CDK2AP1O14519 115 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CLGNO14967 610 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 ERI3O43414 337 aaKnown RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 RAD51CO43502 376 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 SLC19A2O60779 497 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CLEC3AO75596 197 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 STK16O75716 305 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 WISP3O95389 354 aaPredicted RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 CD1DP15813 335 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 GSTM2P28161 218 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 HNRNPH1P31943 449 aaKnown RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 CA7P43166 264 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CYB561P49447 251 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 PLA2G16P53816 162 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 PLTPP55058 493 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CASP6P55212 293 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 MLF1P58340 268 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 ATP6V0D1P61421 351 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 ALDH6A1Q02252 535 aaKnown RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 MAPKAPK3Q16644 382 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 FBXO48Q5FWF7 155 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CDKL4Q5MAI5 379 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 SULT1C3Q6IMI6 304 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 CTAGE3PQ8IX95 158 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.34□□□□□ -1.07
COPB1-211ENST00000534234 KLHDC8AQ8IYD2 350 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 TCAIMQ8N3R3 496 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 FAM98AQ8NCA5 519 aaKnown RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 THAP3Q8WTV1 239 aaPredicted RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 CCDC120Q96HB5 630 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 SEC16BQ96JE7 1060 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 UBXN10Q96LJ8 280 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 GPR22Q99680 433 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 RBBP8Q99708 897 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 NPLQ9BXD5 320 aaPredicted RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 PITHD1Q9GZP4 211 aaPredicted RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 EHD1Q9H4M9 534 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 DNAJC11Q9NVH1 559 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 WWOXQ9NZC7 414 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 GPRC5BQ9NZH0 403 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 GRHL1Q9NZI5 618 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CD274Q9NZQ7 290 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 SUCOQ9UBS9 1254 aaKnown RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 SH3BGRL2Q9UJC5 107 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 ZNF490Q9ULM2 529 aaPredicted RBP8.34□□□□□ -1.07
COPB1-211ENST00000534234 NPIPA1Q9UND3 350 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 ENTPD4Q9Y227 616 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 MMACHCQ9Y4U1 282 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 HIVEP3Q5T1R4 2406 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 CNTRLQ7Z7A1 2325 aa8.34□□□□□ -1.07
COPB1-211ENST00000534234 DOCK10Q96BY6 2186 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 A0A088AWK7 358 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 FAM159BA6NKW6 160 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 PRSS44E7EML9 344 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 HNRNPRO43390 633 aaKnown RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 ASNA1O43681 348 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 B3GALT2O43825 422 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 PRAMEF4O60810 478 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 SLC25A12O75746 678 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 MYO1DO94832 1006 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 TBX6O95947 436 aaPredicted RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 ZNF10P21506 573 aaPredicted RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 TPP2P29144 1249 aaPredicted RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 HPDP32754 393 aaPredicted RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 SPRP35270 261 aaPredicted RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 GP5P40197 560 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 KCNC1P48547 511 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 HSPA7P48741 367 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 HLCSP50747 726 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 CLCN2P51788 898 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 HSD17B7P56937 341 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 GPX6P59796 221 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 RAB10P61026 200 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 SLC13A2Q13183 592 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 ART3Q13508 389 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 DOC2AQ14183 400 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 OR4D1Q15615 310 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 XKR6Q5GH73 641 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 GRTP1Q5TC63 336 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 PRAMEF9Q5VWM5 478 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 MTFR2Q6P444 385 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 MRGPRGQ86SM5 289 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 SPPL2CQ8IUH8 684 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 SNX31Q8N9S9 440 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 B3GNT7Q8NFL0 401 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 OR2L5Q8NG80 312 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 ITLN2Q8WWU7 325 aaPredicted RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 PTCD3Q96EY7 689 aaKnown RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 GPR137Q96N19 417 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 TMEM79Q9BSE2 394 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 REXO4Q9GZR2 422 aaKnown RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 PRTFDC1Q9NRG1 225 aa8.33□□□□□ -1.08
COPB1-211ENST00000534234 PNO1Q9NRX1 252 aaKnown RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 PTBP2Q9UKA9 531 aaKnown RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 UTP11Q9Y3A2 253 aaKnown RBP8.33□□□□□ -1.08
COPB1-211ENST00000534234 NUP210LQ5VU65 1888 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms