RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ADORA3P0DMS8 318 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 GGT2P36268 569 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 SPINT3P49223 89 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 PRIM2P49643 509 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 HBA1P69905 142 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 RAE1P78406 368 aaKnown RBP18.56■□□□□ 0.56
CAPN1-226ENST00000533820 AGTRAPQ6RW13 159 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 CBARPQ8N350 705 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-226ENST00000533820 OR8J2Q8NGG1 315 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 HUS1BQ8NHY5 278 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 MYDGFQ969H8 173 aa18.56■□□□□ 0.56
CAPN1-226ENST00000533820 EXOSC4Q9NPD3 245 aaKnown RBP18.56■□□□□ 0.56
CAPN1-226ENST00000533820 PRAMEF25A6NGN4 478 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 CCNKO75909 580 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 C6orf47O95873 294 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TMPRSS11BQ86T26 416 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 CCDC28AQ8IWP9 274 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 AMER2Q8N7J2 671 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 C7orf57Q8NEG2 295 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 VPS37AQ8NEZ2 397 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 RERGLQ9H628 205 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 ZNF304Q9HCX3 659 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 GPATCH2Q9NW75 528 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 ZNF226Q9NYT6 803 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 STMN3Q9NZ72 180 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 AGAP14A8MT82 685 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 A8MV72 311 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 CDK1P06493 297 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 SOAT1P35610 550 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 NKX3-2P78367 333 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 SYTL3Q4VX76 610 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 METTL2BQ6P1Q9 378 aaKnown RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 SLC51BQ86UW2 128 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TCAIMQ8N3R3 496 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TP53I13Q8NBR0 393 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 MINDY2Q8NBR6 621 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 IGSF21Q96ID5 467 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 HHIPQ96QV1 700 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 SIGLEC11Q96RL6 698 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 IL4I1Q96RQ9 567 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TMEM246Q9BRR3 403 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 MMP27Q9H306 513 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 ERVK13-1Q9NX77 482 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 ANAPC1Q9H1A4 1944 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 GFYI3L273 518 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 CTDSP2O14595 271 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 PQBP1O60828 265 aaKnown RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TGFB1P01137 390 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 RPLP0P05388 317 aaKnown RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 ADRA2AP08913 450 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 HLA-FP30511 346 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 FEN1P39748 380 aaKnown RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 FADDQ13158 208 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 SDE2Q6IQ49 451 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 HSD11B1LQ7Z5J1 315 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 C2orf73Q8N5S3 287 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 CELF2-AS1Q8N7Q2 184 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 WDR20Q8TBZ3 569 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TBC1D20Q96BZ9 403 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 DMRTB1Q96MA1 342 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TSEN34Q9BSV6 310 aaKnown RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 ELAC1Q9H777 363 aaKnown RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 PLSCR3Q9NRY6 295 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 LSM7Q9UK45 103 aaKnown RBP18.55■□□□□ 0.56
CAPN1-226ENST00000533820 RAB23Q9ULC3 237 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 POLHQ9Y253 713 aa18.55■□□□□ 0.56
CAPN1-226ENST00000533820 TSPAN6O43657 245 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 SCO1O75880 301 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 IDSP22304 550 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 CTSCP53634 463 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 POU6F2P78424 691 aaPredicted RBP18.54■□□□□ 0.56
CAPN1-226ENST00000533820 SLC46A3Q7Z3Q1 461 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 FAM217AQ8IXS0 508 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 CYP4Z2PQ8N1L4 340 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 OR7G3Q8NG95 312 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 SORCS1Q8WY21 1168 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 EPYCQ99645 322 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 OR51B5Q9H339 312 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 ERVH48-1M5A8F1 160 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 ARHGEF15O94989 841 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 PDHA2P29803 388 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 SELENOWP63302 87 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 VEZF1Q14119 521 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 DOC2BQ14184 412 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 TSTQ16762 297 aaKnown RBP18.54■□□□□ 0.56
CAPN1-226ENST00000533820 C22orf39Q6P5X5 142 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 MMP21Q8N119 569 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 ZNF366Q8N895 744 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 B3GNT7Q8NFL0 401 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 VOPP1Q96AW1 172 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 SLC35A5Q9BS91 424 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 STOML2Q9UJZ1 356 aa18.54■□□□□ 0.56
CAPN1-226ENST00000533820 ABT1Q9ULW3 272 aaKnown RBP18.54■□□□□ 0.56
CAPN1-226ENST00000533820 DYRK3O43781 588 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 CHRM5P08912 532 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-226ENST00000533820 PRPH2P23942 346 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 EPHB3P54753 998 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 LEXMQ3ZCV2 418 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 Q6ZNB5 142 aa18.53■□□□□ 0.56
CAPN1-226ENST00000533820 METTL4Q8N3J2 472 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms