RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 LDAHQ9H6V9 325 aa8.61□□□□□ -1.03
PACS1-214ENST00000533811 ZNF395Q9H8N7 513 aaPredicted RBP8.61□□□□□ -1.03
PACS1-214ENST00000533811 LIN28AQ9H9Z2 209 aaKnown RBP8.61□□□□□ -1.03
PACS1-214ENST00000533811 NECTIN3Q9NQS3 549 aa8.61□□□□□ -1.03
PACS1-214ENST00000533811 PNO1Q9NRX1 252 aaKnown RBP8.61□□□□□ -1.03
PACS1-214ENST00000533811 SYBUQ9NX95 663 aa8.61□□□□□ -1.03
PACS1-214ENST00000533811 PAK5Q9P286 719 aa8.61□□□□□ -1.03
PACS1-214ENST00000533811 FAM215AQ9Y5M1 114 aa8.61□□□□□ -1.03
PACS1-214ENST00000533811 EPN1Q9Y6I3 576 aaPredicted RBP8.61□□□□□ -1.03
PACS1-214ENST00000533811 FREM3P0C091 2139 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 ATP6AP2A0A1C7CYW4 349 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 ESPNB1AK53 854 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 LIASO43766 372 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 ATP6AP2O75787 350 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 ZSCAN5DPP0CG00 497 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 MPC1LP0DKB6 136 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 RNH1P13489 461 aaKnown RBP8.6□□□□□ -1.03
PACS1-214ENST00000533811 OGNP20774 298 aaKnown RBP8.6□□□□□ -1.03
PACS1-214ENST00000533811 TACR1P25103 407 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 PCSK6P29122 969 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 MAGEA5P43359 124 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 MAN2A2P49641 1150 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 CLCN7P51798 805 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 OASLQ15646 514 aaKnown RBP8.6□□□□□ -1.03
PACS1-214ENST00000533811 WLSQ5T9L3 541 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 HECTD2Q5U5R9 776 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 GK5Q6ZS86 529 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 ABHD13Q7L211 337 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 CPNE9Q8IYJ1 553 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 LRRC57Q8N9N7 239 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 APCDD1LQ8NCL9 501 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 ASB11Q8WXH4 323 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 NCLNQ969V3 563 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 MBD6Q96DN6 1003 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 CALR3Q96L12 384 aaKnown RBP8.6□□□□□ -1.03
PACS1-214ENST00000533811 TCF12Q99081 682 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 GPR21Q99679 349 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 NEUROD4Q9HD90 331 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 FBXO6Q9NRD1 293 aaPredicted RBP8.6□□□□□ -1.03
PACS1-214ENST00000533811 SAMD15Q9P1V8 674 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 CBLCQ9ULV8 474 aa8.6□□□□□ -1.03
PACS1-214ENST00000533811 NCKAP5O14513 1909 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 HRNRQ86YZ3 2850 aaPredicted RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 TCRBV16S1A1N1A0A5B0 115 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 OR14I1A6ND48 311 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 GFYI3L273 518 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 WWP2O00308 870 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 PRKNO60260 465 aaPredicted RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 WDR1O75083 606 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 OR2J2O76002 312 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 OR6B1O95007 311 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ATE1O95260 518 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 HEXAP06865 529 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ENO3P13929 434 aaPredicted RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 BMP5P22003 454 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 SOX3P41225 446 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 SKIV2L2P42285 1042 aaKnown RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 NPY2RP49146 381 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 CCR8P51685 355 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ADARP55265 1226 aaKnown RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 RAB8AP61006 207 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ZNF750Q32MQ0 723 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 SEL1L2Q5TEA6 688 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ZNF470Q6ECI4 717 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 NEPROQ6NW34 567 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 CASC4Q6P4E1 433 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 AGTRAPQ6RW13 159 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 RGS9BPQ6ZS82 235 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 CENPUQ71F23 418 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 TRILQ7L0X0 811 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 KIAA1328Q86T90 577 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 CILP2Q8IUL8 1156 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 PALM2Q8IXS6 379 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 VWA5B2Q8N398 1253 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 TXLNBQ8N3L3 684 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 AFAP1L2Q8N4X5 818 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 TBC1D19Q8N5T2 526 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 TMEM251Q8N6I4 163 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 FAM222BQ8WU58 562 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 LRRC46Q96FV0 321 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 VMP1Q96GC9 406 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 CNPPD1Q9BV87 410 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 FAM129AQ9BZQ8 928 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ZDHHC11Q9H8X9 412 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ZFATQ9P243 1243 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 B4GALT7Q9UBV7 327 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 ZNF223Q9UK11 482 aaPredicted RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 VPS9D1Q9Y2B5 631 aa8.59□□□□□ -1.03
PACS1-214ENST00000533811 YARS2Q9Y2Z4 477 aaKnown RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
PACS1-214ENST00000533811 NINQ8N4C6 2090 aa8.58□□□□□ -1.04
PACS1-214ENST00000533811 VPS13CQ709C8 3753 aa8.58□□□□□ -1.04
PACS1-214ENST00000533811 IGKV3D-11A0A0A0MRZ8 115 aa8.58□□□□□ -1.04
PACS1-214ENST00000533811 PABPN1LA6NDY0 278 aaKnown RBP8.58□□□□□ -1.04
PACS1-214ENST00000533811 MIF4GDA9UHW6 222 aaKnown RBP8.58□□□□□ -1.04
PACS1-214ENST00000533811 FAM47E-STBD1D6RA91 191 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms