RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 KCNA5P22460 613 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 TPTEP56180 551 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 NRG3P56975 720 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 COQ5Q5HYK3 327 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 SCML4Q8N228 414 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 PJA1Q8NG27 643 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 CNDP2Q96KP4 475 aaKnown RBP16.9■□□□□ 0.3
PHRF1-205ENST00000533464 CXCL16Q9H2A7 254 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 MTG2Q9H4K7 406 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 DZANK1Q9NVP4 752 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 MGAT4BQ9UQ53 548 aa16.9■□□□□ 0.3
PHRF1-205ENST00000533464 DRGXA6NNA5 263 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 RTCAO00442 366 aaKnown RBP16.89■□□□□ 0.29
PHRF1-205ENST00000533464 NME4O00746 187 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 OR12D1P0DN82 309 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 TXNL4AP83876 142 aaKnown RBP16.89■□□□□ 0.29
PHRF1-205ENST00000533464 TNFAIP8L3Q5GJ75 292 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 TPRG1LQ5T0D9 272 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 LETMD1Q6P1Q0 360 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 CARM1Q86X55 608 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 OR4K14Q8NGD5 310 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 GPR150Q8NGU9 434 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 CNIH3Q8TBE1 160 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 MCHR1Q99705 422 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 C1QTNF1Q9BXJ1 281 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 KCNK13Q9HB14 408 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 MAFFQ9ULX9 164 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 ZNF451Q9Y4E5 1061 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 NPIPB15A6NHN6 443 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-205ENST00000533464 A8MU76 341 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 HSD17B1P14061 328 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 BMPR1AP36894 532 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 RBBP4Q09028 425 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 C6orf141Q5SZD1 244 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 SMPDL3BQ92485 455 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 NCSTNQ92542 709 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 EMCNQ9ULC0 261 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 RNF6Q9Y252 685 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 SERPINA3P01011 423 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 PTNP21246 168 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 FOXA1P55317 472 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 OLFML2AQ68BL7 652 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 MCEMP1Q8IX19 187 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 ZNF676Q8N7Q3 588 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 LMX1AQ8TE12 382 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 SDR39U1Q9NRG7 319 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-205ENST00000533464 TREX1Q9NSU2 369 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 TLX3O43711 291 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-205ENST00000533464 SLC16A8O95907 504 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 CFIP05156 583 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 MS4A2Q01362 244 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 CSTF1Q05048 431 aaKnown RBP16.89■□□□□ 0.29
PHRF1-205ENST00000533464 TUBA3CQ13748 450 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 ALKAL1Q6UXT8 129 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 TAS1R1Q7RTX1 841 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 SLC9B2Q86UD5 537 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 AVL9Q8NBF6 648 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 MDGA1Q8NFP4 955 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 SFXN1Q9H9B4 322 aa16.89■□□□□ 0.29
PHRF1-205ENST00000533464 ORC5O43913 435 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 FGF4P08620 206 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 STARP49675 285 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 ADAM17P78536 824 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 PUM1Q14671 1186 aaKnown RBP eCLIP16.88■□□□□ 0.292e-8■■□□□ 12.1
PHRF1-205ENST00000533464 OGFRL1Q5TC84 451 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 DEFB119Q8N690 84 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 KLHDC7BQ96G42 594 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 NDC1Q9BTX1 674 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 SLC12A9Q9BXP2 914 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 TRIM2Q9C040 744 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 SCDO00767 359 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 SORBS2O94875 1100 aaKnown RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 LDOC1O95751 146 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 LINGO3P0C6S8 592 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 ZNF182P17025 639 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 TRAM2Q15035 370 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 TAZQ16635 292 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 NXPE4Q6UWF7 544 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 KBTBD6Q86V97 674 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 TNFAIP8L1Q8WVP5 186 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 JPH3Q8WXH2 748 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 FAM83CQ9BQN1 747 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 DPH7Q9BTV6 452 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 PHF24Q9UPV7 400 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 IFI30P13284 250 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 DHPSP49366 369 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 MLLT1Q03111 559 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 SLC22A15Q8IZD6 547 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 PROKR2Q8NFJ6 384 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 TMED9Q9BVK6 235 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 PAK6Q9NQU5 681 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 MARK1Q9P0L2 795 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 PCDHGB1Q9Y5G3 927 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 PCDHGA2Q9Y5H1 932 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 ARMCX6Q7L4S7 300 aa16.88■□□□□ 0.29
PHRF1-205ENST00000533464 LYARQ9NX58 379 aaKnown RBP16.88■□□□□ 0.29
PHRF1-205ENST00000533464 GRIA2P42262 883 aa16.87■□□□□ 0.29
PHRF1-205ENST00000533464 VBP1P61758 197 aa16.87■□□□□ 0.29
PHRF1-205ENST00000533464 TUBA1BP68363 451 aa16.87■□□□□ 0.29
PHRF1-205ENST00000533464 PIGFQ07326 219 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms