RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TMCO1Q9UM00 188 aa21.63■■□□□ 1.05
CAPN1-222ENST00000532285 IGHV3-20A0A0C4DH32 117 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 PRMT3O60678 531 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 TBX6O95947 436 aaPredicted RBP21.62■■□□□ 1.05
CAPN1-222ENST00000532285 ACTN3Q08043 901 aaPredicted RBP21.62■■□□□ 1.05
CAPN1-222ENST00000532285 TGM3Q08188 693 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 PCBP2Q15366 365 aaKnown RBP eCLIP21.62■■□□□ 1.05
CAPN1-222ENST00000532285 INPP5JQ15735 1006 aaPredicted RBP21.62■■□□□ 1.05
CAPN1-222ENST00000532285 PLAG1Q6DJT9 500 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 MED27Q6P2C8 311 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 ADGRD1Q6QNK2 874 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 QSOX2Q6ZRP7 698 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 LINC00696Q6ZRV3 163 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 LAS2Q8IYD9 372 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 IQCKQ8N0W5 287 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 CA13Q8N1Q1 262 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 MTBPQ96DY7 904 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 TXLNGYQ9BZA5 131 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 PTGFRNQ9P2B2 879 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 SHANK1Q9Y566 2161 aa21.62■■□□□ 1.05
CAPN1-222ENST00000532285 A0A0G2JN53 185 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 B3GALT2O43825 422 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 CELA2AP08217 269 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 ITGAMP11215 1152 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 GCAP28676 217 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 SERPINB1P30740 379 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 SOX11P35716 441 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 PIK3CGP48736 1102 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 PLA2G16P53816 162 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 EXT1Q16394 746 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 SFT2D3Q587I9 215 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 ADNP2Q6IQ32 1131 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 ATCAYQ86WG3 371 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 SIRT6Q8N6T7 355 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 SRFBP1Q8NEF9 429 aaKnown RBP21.61■■□□□ 1.05
CAPN1-222ENST00000532285 DNAJB14Q8TBM8 379 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 TSLPQ969D9 159 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 SCYL1Q96KG9 808 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 PTCHD1Q96NR3 888 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 QRFPRQ96P65 431 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 ADGRE2Q9UHX3 823 aa21.61■■□□□ 1.05
CAPN1-222ENST00000532285 UQCRHP07919 91 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 PCNAP12004 261 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 OR4D2P58180 307 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 SLC29A2Q14542 456 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 BTBD16Q32M84 506 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 LIPJQ5W064 366 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 GRHL2Q6ISB3 625 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 ABHD17CQ6PCB6 329 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 PAPD4Q6PIY7 484 aaKnown RBP21.6■■□□□ 1.05
CAPN1-222ENST00000532285 TIFABQ6ZNK6 161 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 CNPY4Q8N129 248 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 OR7G3Q8NG95 312 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 ZNF473Q8WTR7 871 aaKnown RBP21.6■■□□□ 1.05
CAPN1-222ENST00000532285 F2RL3Q96RI0 385 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 SERINC2Q96SA4 455 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 LPAR4Q99677 370 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 COPS7BQ9H9Q2 264 aaPredicted RBP21.6■■□□□ 1.05
CAPN1-222ENST00000532285 PRM3Q9NNZ6 103 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 PRDM9Q9NQV7 894 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 FETUBQ9UGM5 382 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 CSAG2Q9Y5P2 127 aa21.6■■□□□ 1.05
CAPN1-222ENST00000532285 LRRC14BA6NHZ5 514 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 FAM227AF5H4B4 570 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 UGDHO60701 494 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 SMIM24O75264 130 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 MTTPP55157 894 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 BTG2P78543 158 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 GTF2H2Q13888 395 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 RUNX2Q13950 521 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 TMEM35AQ53FP2 167 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 TEX35Q5T0J7 233 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 GTF2H2CQ6P1K8 395 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 CHSY3Q70JA7 882 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 CUZD1Q86UP6 607 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 PTGR2Q8N8N7 351 aaPredicted RBP21.59■■□□□ 1.05
CAPN1-222ENST00000532285 M1APQ8TC57 530 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 ADAMTS18Q8TE60 1221 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 KCNC2Q96PR1 638 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 MRPL57Q9BQC6 102 aaKnown RBP21.59■■□□□ 1.05
CAPN1-222ENST00000532285 MS4A8Q9BY19 250 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 ROGDIQ9GZN7 287 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 IPPKQ9H8X2 491 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 ACTR8Q9H981 624 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 XPR1Q9UBH6 696 aa21.59■■□□□ 1.05
CAPN1-222ENST00000532285 DYTNA2CJ06 578 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 STX16-NPEPL1H3BU86 382 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 E2F3O00716 465 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 STX16O14662 325 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 VPS4BO75351 444 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 SIX3O95343 332 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-222ENST00000532285 RAB38P57729 211 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 GOLGA7Q7Z5G4 137 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 MYLK4Q86YV6 388 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-222ENST00000532285 GSPT2Q8IYD1 628 aaKnown RBP21.58■■□□□ 1.05
CAPN1-222ENST00000532285 GALNT11Q8NCW6 608 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 ARMC2Q8NEN0 867 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 PHF21BQ96EK2 531 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 CMTM7Q96FZ5 175 aa21.58■■□□□ 1.05
CAPN1-222ENST00000532285 CNDP1Q96KN2 507 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms