RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 HNRNPH1P31943 449 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 LSP1P33241 339 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 NEK2P51955 445 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 BTKQ06187 659 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 DDX39BQ13838 428 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 MAP7Q14244 749 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 IMPG1Q17R60 797 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 HKDC1Q2TB90 917 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 SPIN4Q56A73 249 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 TOR1AIP1Q5JTV8 583 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 ADNP2Q6IQ32 1131 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 GALNT18Q6P9A2 607 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 TRIM40Q6P9F5 258 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 ABHD17CQ6PCB6 329 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 LRRC69Q6ZNQ3 347 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 FAM47EQ6ZV65 393 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 METTL4Q8N3J2 472 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 AGR3Q8TD06 166 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 UTP15Q8TED0 518 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 RGMAQ96B86 450 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 PPP3R2Q96LZ3 170 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 QRFPRQ96P65 431 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 DPH2Q9BQC3 489 aaPredicted RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 NPLQ9BXD5 320 aaPredicted RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 TRIM55Q9BYV6 548 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 SPRTNQ9H040 489 aaPredicted RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 NEUROD4Q9HD90 331 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 FARSBQ9NSD9 589 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 CUTCQ9NTM9 273 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 IRAK4Q9NWZ3 460 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 PISDQ9UG56 409 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 ACSL6Q9UKU0 697 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 CDC14AQ9UNH5 594 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 SATB2Q9UPW6 733 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 WASF3Q9UPY6 502 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 TMED5Q9Y3A6 229 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 USH1CQ9Y6N9 552 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 A0A1B0GX78 115 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 ZNF195O14628 629 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 DSCR3O14972 297 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 LSM1O15116 133 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 POLR3GO15318 223 aaPredicted RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 ZNF749O43361 778 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 HYAL3O43820 417 aaPredicted RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 ETHE1O95571 254 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 SERPIND1P05546 499 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 CTSBP07858 339 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 VIMP08670 466 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 PRR35P0CG20 571 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 TROVE2P10155 538 aaKnown RBP eCLIP11.87□□□□□ -0.51
COPB1-208ENST00000532088 ITIH1P19827 911 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 ETV5P41161 510 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 GSTM5P46439 218 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 GNGT1P63211 74 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 TBL3Q12788 808 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 SGO1Q5FBB7 561 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 C3orf38Q5JPI3 329 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 PWWP2BQ6NUJ5 590 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 Q6ZSR9 355 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 PAGE2Q7Z2X7 111 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 TMEM126BQ8IUX1 230 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 DDIASQ8IXT1 998 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 ZCCHC7Q8N3Z6 543 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 KCT2Q8NC54 265 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 CHTF18Q8WVB6 975 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 MTFMTQ96DP5 389 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 C11orf24Q96F05 449 aaPredicted RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 FCRL1Q96LA6 429 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 SLC46A1Q96NT5 459 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 SERINC2Q96SA4 455 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 SPRY4Q9C004 299 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 AICDAQ9GZX7 198 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 NSRP1Q9H0G5 558 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 OR51B5Q9H339 312 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 DDX31Q9H8H2 851 aaKnown RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 ACTR5Q9H9F9 607 aaPredicted RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 ANKHQ9HCJ1 492 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 APMAPQ9HDC9 416 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 FIS1Q9Y3D6 152 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 NEUROG3Q9Y4Z2 214 aa11.87□□□□□ -0.51
COPB1-208ENST00000532088 TMEM184BQ9Y519 407 aaPredicted RBP11.87□□□□□ -0.51
COPB1-208ENST00000532088 DMXL1Q9Y485 3027 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 GMNCA6NCL1 334 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 CDRT15L2A8MXV6 281 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 C9orf172C9J069 976 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 PLPP1O14494 284 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 ERI3O43414 337 aaKnown RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 GALR3O60755 368 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 SHOX2O60902 331 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 SKAP2O75563 359 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 DLGAP3O95886 979 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 LINC00032P0C843 101 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 KITP10721 976 aa11.86□□□□□ -0.51
COPB1-208ENST00000532088 PIM1P11309 404 aaPredicted RBP11.86□□□□□ -0.51
COPB1-208ENST00000532088 RBMS1P29558 406 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms