RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 ZNF28P17035 718 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 LBPP18428 481 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 CERS1P27544 350 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 BSGP35613 385 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 AVPR1BP47901 424 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 CBX1P83916 185 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 LSM12Q3MHD2 195 aaKnown RBP16.75■□□□□ 0.27
CTSB-222ENST00000531551 CCNYL2Q5T2Q4 361 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 ZNF793Q6ZN11 406 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 LARP4Q71RC2 724 aaKnown RBP eCLIP16.75■□□□□ 0.272e-15■□□□□ 11
CTSB-222ENST00000531551 PAGE2Q7Z2X7 111 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 PDSS2Q86YH6 399 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 ARHGEF39Q8N4T4 335 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 SLC38A9Q8NBW4 561 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 CEP70Q8NHQ1 597 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 SMIM10Q96HG1 83 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 MAELQ96JY0 434 aaKnown RBP16.75■□□□□ 0.27
CTSB-222ENST00000531551 CCT8L2Q96SF2 557 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 LHX9Q9NQ69 397 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 PCDHB3Q9Y5E6 796 aa16.75■□□□□ 0.27
CTSB-222ENST00000531551 MDC1Q14676 2089 aaKnown RBP16.75■□□□□ 0.27
CTSB-222ENST00000531551 E9PBE3 544 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 FOXS1O43638 330 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 PCDH7O60245 1069 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 KLHL41O60662 606 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 GALR3O60755 368 aaPredicted RBP16.74■□□□□ 0.27
CTSB-222ENST00000531551 CPNE3O75131 537 aaKnown RBP16.74■□□□□ 0.27
CTSB-222ENST00000531551 HIST1H1TP22492 207 aaPredicted RBP16.74■□□□□ 0.27
CTSB-222ENST00000531551 PRPH2P23942 346 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 OR1D4P47884 311 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 EMP3P54852 163 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 MTTPP55157 894 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 FAM53BQ14153 422 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 YOD1Q5VVQ6 348 aaPredicted RBP16.74■□□□□ 0.27
CTSB-222ENST00000531551 RHBDD2Q6NTF9 364 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 CYP20A1Q6UW02 462 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 ZFAND4Q86XD8 727 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 ACOT4Q8N9L9 421 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 CDC26Q8NHZ8 85 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 DDA1Q9BW61 102 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 YIPF2Q9BWQ6 316 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 ZNF717Q9BY31 904 aaPredicted RBP16.74■□□□□ 0.27
CTSB-222ENST00000531551 POLR1BQ9H9Y6 1135 aa16.74■□□□□ 0.27
CTSB-222ENST00000531551 A0A1B0GX78 115 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 C9orf172C9J069 976 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 DSCR3O14972 297 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 B3GALT2O43825 422 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 RDH16O75452 317 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 HBQ1P09105 142 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 SPINK2P20155 84 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 ATP5A1P25705 553 aaKnown RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 SKP1P63208 163 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 SLAMF1Q13291 335 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 SLC9A5Q14940 896 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 KIAA0040Q15053 153 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 NOXRED1Q6NXP6 359 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 RIPOR1Q6ZS17 1223 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 OR5T3Q8NGG3 340 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 ACTRT2Q8TDY3 377 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 COL26A1Q96A83 441 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 MARK4Q96L34 752 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 QRFPRQ96P65 431 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 ZPBPQ9BS86 351 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 ROGDIQ9GZN7 287 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 ENAMQ9NRM1 1142 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 PCDHGA8Q9Y5G5 932 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 PIEZO1Q92508 2521 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 DNAJB6O75190 326 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 NSA2O95478 260 aaKnown RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 ANXA4P09525 319 aaPredicted RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 TPP2P29144 1249 aaPredicted RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 RBMS1P29558 406 aaKnown RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 TIA1P31483 386 aaKnown RBP eCLIP16.73■□□□□ 0.272e-8■■■□□ 15.1
CTSB-222ENST00000531551 RAE1P78406 368 aaKnown RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 MAT1AQ00266 395 aaKnown RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 IL23RQ5VWK5 629 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 TMEM198Q66K66 360 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 SERINC2Q96SA4 455 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 FOXJ2Q9P0K8 574 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 HCN3Q9P1Z3 774 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 KLK13Q9UKR3 277 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 FBXW2Q9UKT8 454 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 CDC14AQ9UNH5 594 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 EIF3LQ9Y262 564 aaKnown RBP16.73■□□□□ 0.27
CTSB-222ENST00000531551 DLGAP4Q9Y2H0 992 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 TMED5Q9Y3A6 229 aa16.73■□□□□ 0.27
CTSB-222ENST00000531551 TEX51A0A1B0GUA7 166 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 SRRM3A6NNA2 597 aaPredicted RBP16.72■□□□□ 0.27
CTSB-222ENST00000531551 NPIPB8E9PQR5 432 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 SNX3O60493 162 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 STK17BO94768 372 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 PRR35P0CG20 571 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 TSFMP43897 325 aaKnown RBP16.72■□□□□ 0.27
CTSB-222ENST00000531551 GCGRP47871 477 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 MAPK12P53778 367 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 ERVK-8P63133 956 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 EMX2Q04743 252 aa16.72■□□□□ 0.27
CTSB-222ENST00000531551 MAD2L1Q13257 205 aaPredicted RBP16.72■□□□□ 0.27
CTSB-222ENST00000531551 SYT16Q17RD7 645 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms