RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	TTL	Q8NG68	377 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	STAG3L4	Q8TBR4	150 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	BRIX1	Q8TDN6	353 aa	Known RBP	12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	UTP15	Q8TED0	518 aa	Known RBP	12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	PSMF1	Q92530	271 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	PEX11G	Q96HA9	241 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	IMMP1L	Q96LU5	166 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	TUBB6	Q9BUF5	446 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	CAPS2	Q9BXY5	557 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	RBCK1	Q9BYM8	510 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	ALG9	Q9H6U8	611 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	LANCL2	Q9NS86	450 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	DNAJC11	Q9NVH1	559 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	PLA2G3	Q9NZ20	509 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	NINJ2	Q9NZG7	142 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	CD274	Q9NZQ7	290 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	SEC14L3	Q9UDX4	400 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	PTBP2	Q9UKA9	531 aa	Known RBP	12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	RNF112	Q9ULX5	631 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	PKDREJ	Q9NTG1	2253 aa		12.45	□□□□□ -0.42
ABCA7-214	ENST00000531467	TRAV17	A0A0B4J275	112 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	IGHV3-20	A0A0C4DH32	117 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	HMX2	A2RU54	273 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	OR2W5	A6NFC9	320 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	CHST10	O43529	356 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	DIAPH2	O60879	1101 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	DNAJB6	O75190	326 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	H2AFY	O75367	372 aa	Known RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	CDC123	O75794	336 aa	Predicted RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	B3GALT4	O96024	378 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	FH	P07954	510 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	CELA2A	P08217	269 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	LTA4H	P09960	611 aa	Known RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	SMIM10L1	P0DMW3	83 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	ICAM2	P13598	275 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	TFEB	P19484	476 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	CAPN3	P20807	821 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	GSTM2	P28161	218 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	HNF4A	P41235	474 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	KCNC1	P48547	511 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	HSPA7	P48741	367 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	AGTR2	P50052	363 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	TNFSF10	P50591	281 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	AP2B1	P63010	937 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	OLR1	P78380	273 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	SRSF11	Q05519	484 aa	Known RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	BMPR2	Q13873	1038 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	INA	Q16352	499 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	GLE1	Q53GS7	698 aa	Known RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	UBAP2	Q5T6F2	1119 aa	Known RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	MROH9	Q5TGP6	573 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	TMIGD1	Q6UXZ0	262 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	CCDC91	Q7Z6B0	441 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	KRT78	Q8N1N4	520 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	PLPP5	Q8NEB5	264 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	EXT2	Q93063	718 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	ESAM	Q96AP7	390 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	TBC1D20	Q96BZ9	403 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	POM121	Q96HA1	1249 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	SMIM10	Q96HG1	83 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	SEC16B	Q96JE7	1060 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	PITHD1	Q9GZP4	211 aa	Predicted RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	AICDA	Q9GZX7	198 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	TSPYL1	Q9H0U9	437 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	EHD1	Q9H4M9	534 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	KLHL31	Q9H511	634 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	ACSS3	Q9H6R3	686 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	NT5DC2	Q9H857	520 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	CLK4	Q9HAZ1	481 aa	Known RBP	12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	NMRAL1	Q9HBL8	299 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	NUDT4	Q9NZJ9	180 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467	PTGFRN	Q9P2B2	879 aa		12.44	□□□□□ -0.42
ABCA7-214	ENST00000531467		A0A087X1B8	175 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	CLGN	O14967	610 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	PRAMEF4	O60810	478 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	KERA	O60938	352 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	WFS1	O76024	890 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	SEC24D	O94855	1032 aa	Predicted RBP	12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	S100B	P04271	92 aa	Predicted RBP	12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	MST1	P26927	711 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	ECHS1	P30084	290 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	RAB8A	P61006	207 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	STXBP1	P61764	594 aa	Known RBP	12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	RHAG	Q02094	409 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	ABRAXAS2	Q15018	415 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	PDK4	Q16654	411 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	TOR1AIP1	Q5JTV8	583 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	PRAMEF9	Q5VWM5	478 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	LRRC70	Q7Z2Q7	622 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	ANKRD37	Q7Z713	158 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	CDH24	Q86UP0	819 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	CENPL	Q8N0S6	344 aa	Predicted RBP	12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	SIRT6	Q8N6T7	355 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	AMER2	Q8N7J2	671 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	SNX31	Q8N9S9	440 aa		12.43	□□□□□ -0.42
ABCA7-214	ENST00000531467	IFT81	Q8WYA0	676 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms