RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SLC28A1O00337 649 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ESR1P03372 595 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 NFICP08651 508 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ADRA2AP08913 450 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 MLLT11Q13015 90 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 GOLGA7BQ2TAP0 167 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF284Q2VY69 593 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 SPIN4Q56A73 249 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 HES5Q5TA89 166 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 MEDAGQ5VYS4 303 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 C3P1Q6ZMU1 363 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 NAXDQ8IW45 347 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 UBE2J2Q8N2K1 259 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 RAD51AP1Q96B01 352 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 PRMT6Q96LA8 375 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 CINPQ9BW66 212 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 DNTTIP1Q9H147 329 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 OR51M1Q9H341 326 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 NXF3Q9H4D5 531 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 RAD18Q9NS91 495 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 KCTD5Q9NXV2 234 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 HCN3Q9P1Z3 774 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 SLC6A5Q9Y345 797 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 CSADQ9Y600 493 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 PRAMEF33A0A0G2JMD5 474 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 HNRNPCL2B2RXH8 293 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 H3BM21 787 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 PDCD5O14737 125 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 PER2O15055 1255 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 PRAMEF10O60809 474 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 KERAO60938 352 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 RAD17O75943 681 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 SOX30O94993 753 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 SIX3O95343 332 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 IL6P05231 212 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 DNASE1P24855 282 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 APEX1P27695 318 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 AKT1P31749 480 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 MMP12P39900 470 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 EVX1P49640 407 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 STARP49675 285 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 GPR143P51810 404 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ABHD18Q0P651 414 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 GPR17Q13304 367 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 TEX30Q5JUR7 227 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 SYPL2Q5VXT5 272 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ATRAIDQ6UW56 229 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 C17orf107Q6ZR85 190 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 Q6ZSR9 355 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 FGD2Q7Z6J4 655 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 REPS2Q8NFH8 660 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 OR4A15Q8NGL6 344 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 WDR36Q8NI36 951 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 MRPL48Q96GC5 212 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 TINAGL1Q9GZM7 467 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 REEP1Q9H902 201 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 POLE3Q9NRF9 147 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 IMP3Q9NV31 184 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ASIC5Q9NY37 505 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 RPS6KA6Q9UK32 745 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 CHD5Q8TDI0 1954 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 FAM72CH0Y354 149 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 WRBO00258 174 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 NUPL2O15504 423 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 NDUFS6O75380 124 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 UGT2B7P16662 529 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 S100PP25815 95 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 EFNA5P52803 228 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 CDKN2DP55273 166 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 HNRNPA0Q13151 305 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 OPCMLQ14982 345 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 SLC25A52Q3SY17 297 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 SUPT20HL1Q3ZLR7 823 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 FAM72AQ5TYM5 149 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 FAM72DQ6L9T8 149 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 FAM72BQ86X60 149 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 GPR150Q8NGU9 434 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 SCARB1Q8WTV0 552 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 GTF3C2Q8WUA4 911 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 MRPS24Q96EL2 167 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 FCRL5Q96RD9 977 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 UBL7Q96S82 380 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 GAL3ST1Q99999 423 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 OR51J1Q9H342 316 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 SLC25A19Q9HC21 320 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 TXNL4BQ9NX01 149 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 MS4A12Q9NXJ0 267 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 MPP6Q9NZW5 540 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 MLXQ9UH92 298 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 TSR3Q9UJK0 312 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 MGAT4BQ9UQ53 548 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 POFUT2Q9Y2G5 429 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 NUBP2Q9Y5Y2 271 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 WWP2O00308 870 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 GREM1O60565 184 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 CRCPO75575 148 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 CDRT1O95170 752 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 IGHV2-70P01814 119 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 LPLP06858 475 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 PITX1P78337 314 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms