RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 DLEU7Q6UYE1 221 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 PAQR7Q86WK9 346 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 PLXDC1Q8IUK5 500 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 FAM156AQ8NDB6 213 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 DNAJB14Q8TBM8 379 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 STARD8Q92502 1023 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 GTF2H4Q92759 462 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 CENPKQ9BS16 269 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 ZMYND15Q9H091 742 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 RASSF4Q9H2L5 321 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 ABCD2Q9UBJ2 740 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 MCM8Q9UJA3 840 aa13.72□□□□□ -0.21
TTC39A-216ENST00000530004 ATXN7L1Q9ULK2 861 aaPredicted RBP13.72□□□□□ -0.21
TTC39A-216ENST00000530004 RP1P56715 2156 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 MN1Q10571 1320 aaPredicted RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 PRORSD1PA6NEY8 169 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 RTCAO00442 366 aaKnown RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 SCAMP2O15127 329 aaKnown RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 KCNH1O95259 989 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 STATHP02808 62 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 CEACAM1P13688 526 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 COX7A2P14406 83 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 TCN1P20061 433 aaPredicted RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 MAGP20916 626 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 HNRNPH1P31943 449 aaKnown RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 AHRP35869 848 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 HPCAL1P37235 193 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 KIR3DL1P43629 444 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 ERFP50548 548 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 E2F1Q01094 437 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 CYP4F3Q08477 520 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 PWP1Q13610 501 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 ZIC1Q15915 447 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 SNCBQ16143 134 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 SLC5A12Q1EHB4 618 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 DPY19L1Q2PZI1 675 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 CCDC157Q569K6 752 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 SAMD4BQ5PRF9 694 aaKnown RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 TMEM71Q6P5X7 295 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 TMPRSS9Q7Z410 1059 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 MFSD9Q8NBP5 474 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 OR7A2PQ8NGA2 310 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 C16orf78Q8WTQ4 265 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 PPM1MQ96MI6 270 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 TGM7Q96PF1 710 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 GFM1Q96RP9 751 aaKnown RBP13.71□□□□□ -0.21
TTC39A-216ENST00000530004 TRIM8Q9BZR9 551 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 SYNDIG1Q9H7V2 258 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 TMEM9Q9P0T7 183 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 MAPRE3Q9UPY8 281 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 WDR87Q6ZQQ6 2873 aa13.71□□□□□ -0.21
TTC39A-216ENST00000530004 ZNF292O60281 2723 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 LRIT2A6NDA9 550 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 NME4O00746 187 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 MAP3K7O43318 606 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 KLHL18O94889 574 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 FKBP9O95302 570 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 LSSP48449 732 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 SPIDRQ14159 915 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 OR4F3Q6IEY1 312 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 ANKRD26P1Q6NSI1 321 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 ZNF574Q6ZN55 896 aaPredicted RBP13.71□□□□□ -0.22
TTC39A-216ENST00000530004 GPR180Q86V85 440 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 SLC15A3Q8IY34 581 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 STMN2Q93045 179 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 TMEM125Q96AQ2 219 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 RGMAQ96B86 450 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 FAM122AQ96E09 287 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 CD180Q99467 661 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 MAP3K3Q99759 626 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 DPYSL5Q9BPU6 564 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 ZNF717Q9BY31 904 aaPredicted RBP13.71□□□□□ -0.22
TTC39A-216ENST00000530004 REXO4Q9GZR2 422 aaKnown RBP13.71□□□□□ -0.22
TTC39A-216ENST00000530004 RMND5AQ9H871 391 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 SYNPO2LQ9H987 977 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 CMTM6Q9NX76 183 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 CD300AQ9UGN4 299 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 L3MBTL1Q9Y468 752 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 PCDHA9Q9Y5H5 950 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 AP1M2Q9Y6Q5 423 aa13.71□□□□□ -0.22
TTC39A-216ENST00000530004 A0A0J9YY10 115 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 SPAARA0A1B0GVQ0 90 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 OR2A25A4D2G3 310 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 D6RAR5 112 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 KIF1CO43896 1103 aaKnown RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 DKK1O94907 266 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 B3GALT4O96024 378 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 PIM1P11309 404 aaPredicted RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 CDH3P22223 829 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 TPP2P29144 1249 aaPredicted RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 BSGP35613 385 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 NOVA1P51513 510 aaKnown RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 TAS2R50P59544 299 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 RPS15AP62244 130 aaKnown RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 CCNIQ14094 377 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 RSPO4Q2I0M5 234 aaPredicted RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 RABL3Q5HYI8 236 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms