RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 GLSO94925 669 aaPredicted RBP17.61■□□□□ 0.41
SSRP1-204ENST00000529002 IGHG3P01860 377 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 HRH2P25021 359 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 STIP1P31948 543 aaKnown RBP17.61■□□□□ 0.41
SSRP1-204ENST00000529002 HNF4AP41235 474 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 KIAA0408Q6ZU52 694 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 C17orf64Q86WR6 236 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 CIARTQ8N365 385 aaPredicted RBP17.61■□□□□ 0.41
SSRP1-204ENST00000529002 C1orf54Q8WWF1 131 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 NCLNQ969V3 563 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 PDLIM2Q96JY6 352 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 SPNS1Q9H2V7 528 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 ZNF395Q9H8N7 513 aaPredicted RBP17.61■□□□□ 0.41
SSRP1-204ENST00000529002 PNO1Q9NRX1 252 aaKnown RBP17.61■□□□□ 0.41
SSRP1-204ENST00000529002 ADAMTS6Q9UKP5 1117 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 EDARQ9UNE0 448 aa17.61■□□□□ 0.41
SSRP1-204ENST00000529002 ATP6AP2A0A1C7CYW4 349 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 OR14I1A6ND48 311 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 A8MVJ9 347 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 KDM4EB2RXH2 506 aaPredicted RBP17.6■□□□□ 0.41
SSRP1-204ENST00000529002 TGFBR3LH3BV60 316 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 OR1F1O43749 312 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 ATP6AP2O75787 350 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 FTCDO95954 541 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 MPC1LP0DKB6 136 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 TACR1P25103 407 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 SOX3P41225 446 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 WNT3P56703 355 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 RAB8AP61006 207 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 NAE1Q13564 534 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 RNF187Q5TA31 235 aaPredicted RBP17.6■□□□□ 0.41
SSRP1-204ENST00000529002 FBXW10Q5XX13 1052 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 ZNF549Q6P9A3 640 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 SEM1Q6ZVN7 128 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 CXXC5Q7LFL8 322 aaKnown RBP17.6■□□□□ 0.41
SSRP1-204ENST00000529002 SLC22A16Q86VW1 577 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 CPNE9Q8IYJ1 553 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 PANX2Q96RD6 677 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 SH3GL2Q99962 352 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 SEMA4BQ9NPR2 832 aaPredicted RBP17.6■□□□□ 0.41
SSRP1-204ENST00000529002 PRDM9Q9NQV7 894 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 HPF1Q9NWY4 346 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 SPRR3Q9UBC9 169 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 AMFRQ9UKV5 643 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 ZNF148Q9UQR1 794 aa17.6■□□□□ 0.41
SSRP1-204ENST00000529002 REXO2Q9Y3B8 237 aaKnown RBP17.6■□□□□ 0.41
SSRP1-204ENST00000529002 A0A1B0GVC2 190 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 C4orf51C9J302 202 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 WWP2O00308 870 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 SYT5O00445 386 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 ENDOUP21128 410 aaKnown RBP17.59■□□□□ 0.41
SSRP1-204ENST00000529002 RPL22P35268 128 aaKnown RBP17.59■□□□□ 0.41
SSRP1-204ENST00000529002 DNASE1L1P49184 302 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 GPR143P51810 404 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 ADARP55265 1226 aaKnown RBP17.59■□□□□ 0.41
SSRP1-204ENST00000529002 AGTRAPQ6RW13 159 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 PEX26Q7Z412 305 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 NAXEQ8NCW5 288 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 UTP15Q8TED0 518 aaKnown RBP17.59■□□□□ 0.41
SSRP1-204ENST00000529002 FAM222BQ8WU58 562 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 ASB15Q8WXK1 588 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 TCF12Q99081 682 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 GPR21Q99679 349 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 KIFC1Q9BW19 673 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 IL22Q9GZX6 179 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 KLHL31Q9H511 634 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 PLEKHF2Q9H8W4 249 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 BFARQ9NZS9 450 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 VPS9D1Q9Y2B5 631 aa17.59■□□□□ 0.41
SSRP1-204ENST00000529002 YARS2Q9Y2Z4 477 aaKnown RBP17.59■□□□□ 0.41
SSRP1-204ENST00000529002 MYOCOSA0A1B0GUC4 107 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 AQP7O14520 342 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 WDR1O75083 606 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 NPPBP16860 134 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 OGNP20774 298 aaKnown RBP17.58■□□□□ 0.4
SSRP1-204ENST00000529002 GRK3P35626 688 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 MAN2A2P49641 1150 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 NKX6-1P78426 367 aaPredicted RBP17.58■□□□□ 0.4
SSRP1-204ENST00000529002 TTLL9Q3SXZ7 439 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 CILP2Q8IUL8 1156 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 DENND6AQ8IWF6 608 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 LINC01560Q8TB33 94 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 KIAA1191Q96A73 305 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 VMP1Q96GC9 406 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 CAPZA3Q96KX2 299 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 LDAHQ9H6V9 325 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 NEUROD4Q9HD90 331 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 FBXO6Q9NRD1 293 aaPredicted RBP17.58■□□□□ 0.4
SSRP1-204ENST00000529002 TUBA8Q9NY65 449 aaPredicted RBP17.58■□□□□ 0.4
SSRP1-204ENST00000529002 PDE10AQ9Y233 779 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 CLDN16Q9Y5I7 305 aa17.58■□□□□ 0.4
SSRP1-204ENST00000529002 A0A1W2PPR1 153 aa17.57■□□□□ 0.4
SSRP1-204ENST00000529002 ZNF354AO60765 605 aaPredicted RBP17.57■□□□□ 0.4
SSRP1-204ENST00000529002 BMP5P22003 454 aa17.57■□□□□ 0.4
SSRP1-204ENST00000529002 NPY2RP49146 381 aa17.57■□□□□ 0.4
SSRP1-204ENST00000529002 TERF1P54274 439 aa17.57■□□□□ 0.4
SSRP1-204ENST00000529002 DCAF7P61962 342 aa17.57■□□□□ 0.4
SSRP1-204ENST00000529002 CTBP1Q13363 440 aa17.57■□□□□ 0.4
SSRP1-204ENST00000529002 DAZAP2Q15038 168 aaPredicted RBP17.57■□□□□ 0.4
SSRP1-204ENST00000529002 POU4F3Q15319 338 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms