RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 PROX1Q92786 737 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 C7orf34Q96L11 122 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 MKRN2Q9H000 416 aaKnown RBP12.49□□□□□ -0.41
RBM39-243ENST00000528062 SLC6A17Q9H1V8 727 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.49□□□□□ -0.41
RBM39-243ENST00000528062 MMP17Q9ULZ9 603 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 RNF6Q9Y252 685 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 SLC22A14Q9Y267 594 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 GPC6Q9Y625 555 aaPredicted RBP12.49□□□□□ -0.41
RBM39-243ENST00000528062 LRRK1Q38SD2 2015 aa12.49□□□□□ -0.41
RBM39-243ENST00000528062 NUMA1Q14980 2115 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 AGAP14A8MT82 685 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 NPC1O15118 1278 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 HOXB2P14652 356 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 NNMTP40261 264 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 CSNK1DP48730 415 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 TRPC1P48995 793 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 LYPLAL1Q5VWZ2 237 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 LRRC70Q7Z2Q7 622 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 CYP2U1Q7Z449 544 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 TSEN54Q7Z6J9 526 aaKnown RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 SLC38A4Q969I6 547 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 TPD52L3Q96J77 140 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 KLHL25Q9H0H3 589 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 REEP1Q9H902 201 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 ANKMY1Q9P2S6 941 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 SCN8AQ9UQD0 1980 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 MAGEB17A8MXT2 336 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 CHURC1-FNTBB4DL54 471 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 MYO1DO94832 1006 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 EPN2O95208 641 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 IGSF6O95976 241 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 GSTT2P0CG29 244 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 GSTT2BP0CG30 244 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 CD22P20273 847 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 GRK5P34947 590 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 SLC19A1P41440 591 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 NSG1P42857 185 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 HNRNPFP52597 415 aaKnown RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 SNRPD1P62314 119 aaKnown RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 HSPA14Q0VDF9 509 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 GPR33Q49SQ1 333 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 ATP13A5Q4VNC0 1218 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 COLEC12Q5KU26 742 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 ZNF362Q5T0B9 420 aaPredicted RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 FRG2Q64ET8 278 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 MSANTD1Q6ZTZ1 278 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 LYSMD2Q8IV50 215 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 SKA2Q8WVK7 121 aaPredicted RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
RBM39-243ENST00000528062 MAL2Q969L2 176 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 DACH2Q96NX9 599 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 KCNC2Q96PR1 638 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 FRG2BQ96QU4 278 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 SLC12A9Q9BXP2 914 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 ITPAQ9BY32 194 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 CHRDQ9H2X0 955 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 TMED5Q9Y3A6 229 aa12.48□□□□□ -0.41
RBM39-243ENST00000528062 DOCK9Q9BZ29 2069 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 PABPN1LA6NDY0 278 aaKnown RBP12.47□□□□□ -0.41
RBM39-243ENST00000528062 METTL15A6NJ78 407 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 NPIPB8E9PQR5 432 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 MRPS14O60783 128 aaKnown RBP12.47□□□□□ -0.41
RBM39-243ENST00000528062 LEFTY1O75610 366 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 UPK1BO75841 260 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 C9P02748 559 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 LAMP1P11279 417 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 PRPS1L1P21108 318 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 GADD45AP24522 165 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 MAPK1P28482 360 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 AQP1P29972 269 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 KCNJ10P78508 379 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 LRRC32Q14392 662 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ELAVL3Q14576 367 aaKnown RBP12.47□□□□□ -0.41
RBM39-243ENST00000528062 KCNJ8Q15842 424 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CARTPTQ16568 116 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 SOWAHCQ53LP3 525 aaPredicted RBP12.47□□□□□ -0.41
RBM39-243ENST00000528062 CRTC1Q6UUV9 634 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ARMC8Q8IUR7 673 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 SYT12Q8IV01 421 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 SYNPOQ8N3V7 929 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 CDC26Q8NHZ8 85 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 HTRA1Q92743 480 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 HRASLS5Q96KN8 279 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 FCRL1Q96LA6 429 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 NELL2Q99435 816 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 COPS4Q9BT78 406 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ATG10Q9H0Y0 220 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 ZDHHC6Q9H6R6 413 aa12.47□□□□□ -0.41
RBM39-243ENST00000528062 RNF167Q9H6Y7 350 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms