RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MRPL1Q9BYD6 325 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 RBCK1Q9BYM8 510 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 STRADBQ9C0K7 418 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 RABEP2Q9H5N1 569 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 WDR55Q9H6Y2 383 aaPredicted RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 MED4Q9NPJ6 270 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 PRDM7Q9NQW5 492 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 ENAMQ9NRM1 1142 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 CUTCQ9NTM9 273 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 MID2Q9UJV3 735 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 RARRES3Q9UL19 164 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 EXO1Q9UQ84 846 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.42
CD44-214ENST00000525211 MRPS18BQ9Y676 258 aaKnown RBP6.15□□□□□ -1.42
CD44-214ENST00000525211 SCN2AQ99250 2005 aa6.15□□□□□ -1.43
CD44-214ENST00000525211 APC2O95996 2303 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ANKDD1BA6NHY2 528 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TMEM114B3SHH9 223 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TCP11X1B4DZS4 312 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 KLF11O14901 512 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ERI3O43414 337 aaKnown RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 SRPX2O60687 465 aaPredicted RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 UGDHO60701 494 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 EDF1O60869 148 aaKnown RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 CLEC3AO75596 197 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 HSPA4LO95757 839 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 SERPINA6P08185 405 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 FGF4P08620 206 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CDK4P11802 303 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 NEFHP12036 1026 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ALAS2P22557 587 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 HRH2P25021 359 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TACR1P25103 407 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ATP5A1P25705 553 aaKnown RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 CERS1P27544 350 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TPP2P29144 1249 aaPredicted RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 HMOX2P30519 316 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 MDH1P40925 334 aaKnown RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 SEC24CP53992 1094 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 HNRNPH2P55795 449 aaKnown RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 DUSP2Q05923 314 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ZNF750Q32MQ0 723 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.14□□□□□ -1.43
CD44-214ENST00000525211 DEFB134Q4QY38 66 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 XKR7Q5GH72 579 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TMTC4Q5T4D3 741 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 KHDRBS2Q5VWX1 349 aaKnown RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 FAM198BQ6UWH4 519 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 SHISA6Q6ZSJ9 500 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TRIM46Q7Z4K8 759 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 VASH2Q86V25 355 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 PPP1R3BQ86XI6 285 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 DTX1Q86Y01 620 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TMEM126BQ8IUX1 230 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 PRSS58Q8IYP2 241 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 DSELQ8IZU8 1212 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 KRT78Q8N1N4 520 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 C1orf52Q8N6N3 182 aaKnown RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 PPP1R14CQ8TAE6 165 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 FAM76AQ8TAV0 307 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 DOK4Q8TEW6 326 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CT55Q8WUE5 264 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CHTF18Q8WVB6 975 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 SELENOMQ8WWX9 145 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 C11orf24Q96F05 449 aaPredicted RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 EGLN2Q96KS0 407 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 MARK4Q96L34 752 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 MAGEB18Q96M61 343 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ZNF317Q96PQ6 595 aaPredicted RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 OR52B2Q96RD2 323 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CSF3RQ99062 836 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 MAPKAP1Q9BPZ7 522 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 C17orf62Q9BQA9 187 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 EBF4Q9BQW3 602 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 DDA1Q9BW61 102 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CAPS2Q9BXY5 557 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 EBPLQ9BY08 206 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 SLC29A3Q9BZD2 475 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 NUF2Q9BZD4 464 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ULBP3Q9BZM4 244 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 NRSN2Q9GZP1 204 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CHST8Q9H2A9 424 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ACBD3Q9H3P7 528 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 ACTR5Q9H9F9 607 aaPredicted RBP6.14□□□□□ -1.43
CD44-214ENST00000525211 KCNK13Q9HB14 408 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 IRAK4Q9NWZ3 460 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 KCMF1Q9P0J7 381 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 HCN3Q9P1Z3 774 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CTSFQ9UBX1 484 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 IL17BQ9UHF5 180 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 SERTAD3Q9UJW9 196 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 SLC12A4Q9UP95 1085 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 DLGAP4Q9Y2H0 992 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 MSRB2Q9Y3D2 182 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 RAP2CQ9Y3L5 183 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 NAALAD2Q9Y3Q0 740 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 TSC22D4Q9Y3Q8 395 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 NEUROG3Q9Y4Z2 214 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 PCDHGA3Q9Y5H0 932 aa6.14□□□□□ -1.43
CD44-214ENST00000525211 CLDN16Q9Y5I7 305 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms