RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 RDH8Q9NYR8 311 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 LRFN2Q9ULH4 789 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 MAN2B2Q9Y2E5 1009 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ALG5Q9Y673 324 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SH3D21A4FU49 640 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 LYRM1O43325 122 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TBL1XO60907 577 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 DDNO94850 711 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 F2P00734 622 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 CATP04040 527 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TRAPPC2P0DI81 140 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TRAPPC2BP0DI82 140 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 PCSK2P16519 638 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 MRPL19P49406 292 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF81P51508 661 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 RPS7P62081 194 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SETMARQ53H47 684 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 IDNKQ5T6J7 187 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 LAIR1Q6GTX8 287 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TNFAIP8L2Q6P589 184 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 FAM171BQ6P995 826 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 GDPGP1Q6ZNW5 385 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 FAM92BQ6ZTR7 304 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 LRRC70Q7Z2Q7 622 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 RNF175Q8N4F7 328 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TEX26Q8N6G2 289 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ZFP41Q8N8Y5 198 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 PIP5K1AQ99755 562 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SPATA9Q9BWV2 254 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 PAK6Q9NQU5 681 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 PRDM5Q9NQX1 630 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 RLIMQ9NVW2 624 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TAS2R7Q9NYW3 318 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TRPM5Q9NZQ8 1165 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 B8ZZF3 427 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 AKR7A2O43488 359 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PCDH7O60245 1069 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 KLK8O60259 260 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 CLDN7O95471 211 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 IFNA7P01567 189 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 IL1RNP18510 177 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PKLRP30613 574 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 CORO1AP31146 461 aaKnown RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 HOXA9P31269 272 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 TGM4P49221 684 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 SMIM11AP58511 58 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 TIAL1Q01085 375 aaKnown RBP eCLIP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 DUSP4Q13115 394 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 GPR50Q13585 617 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 VEZF1Q14119 521 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF792Q3KQV3 632 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ESCO2Q56NI9 601 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 SPOUT1Q5T280 376 aaKnown RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 AGMOQ6ZNB7 445 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 TMPRSS11BQ86T26 416 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 OR6C4Q8NGE1 309 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 OR52E4Q8NGH9 312 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 MGME1Q9BQP7 344 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 TMED9Q9BVK6 235 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ELOVL2Q9NXB9 296 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 QPCTLQ9NXS2 382 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 FBXO9Q9UK97 447 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ACSL6Q9UKU0 697 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 KCNE2Q9Y6J6 123 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 LOC102723532A0A0G2JNH3 316 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 GSAPA4D1B5 854 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 SAP18O00422 153 aaKnown RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 TSPAN12O95859 305 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 C6orf47O95873 294 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PAICSP22234 425 aaKnown RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PPP2R1BP30154 601 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 MLLT3P42568 568 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 CRISP3P54108 245 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PPP3R1P63098 170 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 SELENOWP63302 87 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 FGFBP1Q14512 234 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ATP13A5Q4VNC0 1218 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 CDC73Q6P1J9 531 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 TEX47Q8TBZ9 253 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PCNPQ8WW12 178 aaKnown RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 MAGEB10Q96LZ2 347 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 UROC1Q96N76 676 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 SLC38A2Q96QD8 506 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PITX2Q99697 317 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ARPC5LQ9BPX5 153 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 DPCDQ9BVM2 203 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 OSER1Q9NX31 292 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 SEC14L3Q9UDX4 400 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PHF11Q9UIL8 331 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PADI3Q9ULW8 664 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 A0A1B0GVM2 712 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 A0A1W2PRG6 482 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 B4DXG7 233 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PCDH17O14917 1159 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF780AO75290 641 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-212ENST00000523387 PEX11BO96011 259 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 CLEC2LP0C7M8 214 aa8.68□□□□□ -1.02
CSMD1-212ENST00000523387 APEX1P27695 318 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms