RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MAGEA3P43357 314 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 RAB8AP61006 207 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 HSP90AA5PQ58FG0 334 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 ACAD11Q709F0 780 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 ANKRD53Q8N9V6 530 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 XAB2Q9HCS7 855 aaKnown RBP21.17■□□□□ 0.98
PVT1-218ENST00000523328 FBXW2Q9UKT8 454 aa21.17■□□□□ 0.98
PVT1-218ENST00000523328 PPIEQ9UNP9 301 aaKnown RBP21.17■□□□□ 0.98
PVT1-218ENST00000523328 PINLYPA6NC86 204 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 GOLGA8MH3BSY2 632 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 PSMD12O00232 456 aaPredicted RBP21.16■□□□□ 0.98
PVT1-218ENST00000523328 MYO1DO94832 1006 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 TUBB4AP04350 444 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 HIST1H2AGP0C0S8 130 aaPredicted RBP21.16■□□□□ 0.98
PVT1-218ENST00000523328 HIST1H2ADP20671 130 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 HNF4AP41235 474 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 GPR143P51810 404 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 MYBPHQ13203 477 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 TERF2Q15554 542 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 GXYLT1Q4G148 440 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 TBC1D19Q8N5T2 526 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 PSD4Q8NDX1 1056 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 ARMC2Q8NEN0 867 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 NEIL2Q969S2 332 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 LINGO1Q96FE5 620 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 PDLIM2Q96JY6 352 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 HIST1H2AHQ96KK5 128 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 HIST1H2AJQ99878 128 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 FOXC2Q99958 501 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 FAM167BQ9BTA0 163 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 H2AFJQ9BTM1 129 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 AICDAQ9GZX7 198 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 RHBGQ9H310 441 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 ZDHHC11Q9H8X9 412 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 SLC24A3Q9HC58 644 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 TIMMDC1Q9NPL8 285 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 ARL15Q9NXU5 204 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 TAS2R13Q9NYV9 303 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 KCMF1Q9P0J7 381 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 CLDN16Q9Y5I7 305 aa21.16■□□□□ 0.98
PVT1-218ENST00000523328 NPIPA2E9PIF3 369 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 NPIPA3F8WFD2 350 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 PRKNO60260 465 aaPredicted RBP21.15■□□□□ 0.98
PVT1-218ENST00000523328 SSR4P51571 173 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 CDKN2DP55273 166 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 RBM20Q5T481 1227 aaKnown RBP21.15■□□□□ 0.98
PVT1-218ENST00000523328 PAOXQ6QHF9 649 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 TGIF2LYQ8IUE0 185 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 CLYBLQ8N0X4 340 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 CA13Q8N1Q1 262 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 C2CD4AQ8NCU7 369 aaPredicted RBP21.15■□□□□ 0.98
PVT1-218ENST00000523328 OR5M3Q8NGP4 307 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 SLC5A11Q8WWX8 675 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 VMP1Q96GC9 406 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 SIGLEC10Q96LC7 697 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 KLHL31Q9H511 634 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 HOMER3Q9NSC5 361 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 IARS2Q9NSE4 1012 aaKnown RBP21.15■□□□□ 0.98
PVT1-218ENST00000523328 PNPLA3Q9NST1 481 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 MMACHCQ9Y4U1 282 aa21.15■□□□□ 0.98
PVT1-218ENST00000523328 URADA6NGE7 173 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 TMEM200CA6NKL6 621 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 ZWINTO95229 277 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 KRT14P02533 472 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 GABRB3P28472 473 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 AP1S2P56377 157 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 PPIAP62937 165 aaKnown RBP21.14■□□□□ 0.97
PVT1-218ENST00000523328 REEP5Q00765 189 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 CSHL1Q14406 222 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 C16orf47Q6ZP98 133 aaPredicted RBP21.14■□□□□ 0.97
PVT1-218ENST00000523328 SCUBE1Q8IWY4 988 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 NINJ1Q92982 152 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 NCLNQ969V3 563 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 FBXL8Q96CD0 374 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 RBSNQ9H1K0 784 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 YARS2Q9Y2Z4 477 aaKnown RBP21.14■□□□□ 0.97
PVT1-218ENST00000523328 L3MBTL1Q9Y468 752 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 MAD1L1Q9Y6D9 718 aa21.14■□□□□ 0.97
PVT1-218ENST00000523328 ABCA2Q9BZC7 2435 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 FAM166BA8MTA8 275 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 TGFBR3LH3BV60 316 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 PPP2R1BP30154 601 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 DLX5P56178 289 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 FOLH1Q04609 750 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 TTC27Q6P3X3 843 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.13■□□□□ 0.97
PVT1-218ENST00000523328 TRPV3Q8NET8 790 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 OR2M7Q8NG81 312 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 TSNARE1Q96NA8 513 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 TTYH2Q9BSA4 534 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 LIN28AQ9H9Z2 209 aaKnown RBP21.13■□□□□ 0.97
PVT1-218ENST00000523328 PNO1Q9NRX1 252 aaKnown RBP21.13■□□□□ 0.97
PVT1-218ENST00000523328 CCM2LQ9NUG4 571 aaPredicted RBP21.13■□□□□ 0.97
PVT1-218ENST00000523328 ERVK-11Q9UQG0 969 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 FAM215AQ9Y5M1 114 aa21.13■□□□□ 0.97
PVT1-218ENST00000523328 A0A0G2JMM0 328 aa21.12■□□□□ 0.97
PVT1-218ENST00000523328 A0A1W2PPB8 328 aa21.12■□□□□ 0.97
PVT1-218ENST00000523328 A0A1W2PRS3 328 aa21.12■□□□□ 0.97
PVT1-218ENST00000523328 A8MVJ9 347 aa21.12■□□□□ 0.97
PVT1-218ENST00000523328 KIR3DP1A8MWS1 328 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms