RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ATP6AP2O75787 350 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 RSL1D1O76021 490 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 DLGAP3O95886 979 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 B3GALT4O96024 378 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 ZNF888P0CJ79 500 aaPredicted RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 SMIM10L1P0DMW3 83 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 TROVE2P10155 538 aaKnown RBP eCLIP11.32□□□□□ -0.6
PVT1-215ENST00000522963 LIFP15018 202 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 PLA2G16P53816 162 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 AQP5P55064 265 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 UCNP55089 124 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 VAC14Q08AM6 782 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 TBL3Q12788 808 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 SF3A3Q12874 501 aaKnown RBP eCLIP11.32□□□□□ -0.6
PVT1-215ENST00000522963 GRM7Q14831 915 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 NR6A1Q15406 480 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 TMEM35AQ53FP2 167 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 TLDC1Q6P9B6 456 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 ABHD17CQ6PCB6 329 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 EPGNQ6UW88 154 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 BPHLQ86WA6 291 aaPredicted RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 DTWD1Q8N5C7 304 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 ESX1Q8N693 406 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 CHTF18Q8WVB6 975 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 GAL3ST3Q96A11 431 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 APIPQ96GX9 242 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 SMIM10Q96HG1 83 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 EBF4Q9BQW3 602 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 SORBS1Q9BX66 1292 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 MRPL1Q9BYD6 325 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 TRIM55Q9BYV6 548 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 SPRY4Q9C004 299 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 FAM107BQ9H098 131 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 RABEP2Q9H5N1 569 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 WDR55Q9H6Y2 383 aaPredicted RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 GPN2Q9H9Y4 310 aaPredicted RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 KCNK13Q9HB14 408 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 DCTN4Q9UJW0 460 aa11.32□□□□□ -0.6
PVT1-215ENST00000522963 RALYQ9UKM9 306 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 MDC1Q14676 2089 aaKnown RBP11.32□□□□□ -0.6
PVT1-215ENST00000522963 GOLGA8QA0A0J9YX86 632 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 GOLGA8OA6NCC3 632 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 URADA6NGE7 173 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 NPIPB8E9PQR5 432 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 GOLGA8NF8WBI6 632 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 PLPP1O14494 284 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 EFSO43281 561 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 ZNF749O43361 778 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 FOXS1O43638 330 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 DIAPH2O60879 1101 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 CPNE3O75131 537 aaKnown RBP11.31□□□□□ -0.6
PVT1-215ENST00000522963 PEX11AO75192 247 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 SEMA3DO95025 777 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 ALOX12P18054 663 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 PRPH2P23942 346 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 EPHA3P29320 983 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 BSGP35613 385 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 DLSTP36957 453 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 IDH3AP50213 366 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 RAP1GDS1P52306 607 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 EMP3P54852 163 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 RAB8AP61006 207 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 NDUFA9Q16795 377 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 GALNTL6Q49A17 601 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 SPDYAQ5MJ70 313 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 GARNL3Q5VVW2 1013 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 FAM199XQ6PEV8 388 aaPredicted RBP11.31□□□□□ -0.6
PVT1-215ENST00000522963 ABHD13Q7L211 337 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 PRSS41Q7RTY9 318 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 METTL4Q8N3J2 472 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 AMER3Q8N944 861 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 ZSCAN1Q8NBB4 408 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 OR2L5Q8NG80 312 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 MR1Q95460 341 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 RGMAQ96B86 450 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 TUBGCP3Q96CW5 907 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 MAELQ96JY0 434 aaKnown RBP11.31□□□□□ -0.6
PVT1-215ENST00000522963 PPP3R2Q96LZ3 170 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 QRFPRQ96P65 431 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 OR52B2Q96RD2 323 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 C17orf62Q9BQA9 187 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 CENPKQ9BS16 269 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 ZNF717Q9BY31 904 aaPredicted RBP11.31□□□□□ -0.6
PVT1-215ENST00000522963 EPN3Q9H201 632 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 AKTIPQ9H8T0 292 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 ACTR5Q9H9F9 607 aaPredicted RBP11.31□□□□□ -0.6
PVT1-215ENST00000522963 LRTM1Q9HBL6 345 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 LHX9Q9NQ69 397 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 PFDN4Q9NQP4 134 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 CUTCQ9NTM9 273 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 RIC8BQ9NVN3 520 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 NMRK1Q9NWW6 199 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 C1orf109Q9NX04 203 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 PADI1Q9ULC6 663 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 SLC22A7Q9Y694 548 aa11.31□□□□□ -0.6
PVT1-215ENST00000522963 CCDC88CQ9P219 2028 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 DMXL2Q8TDJ6 3036 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 A0A0G2JND7 137 aa11.3□□□□□ -0.6
PVT1-215ENST00000522963 SEC22BO75396 215 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms