RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SOX8P57073 446 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 STXBP1P61764 594 aaKnown RBP16.81■□□□□ 0.28
CLK4-211ENST00000522556 TLE1Q04724 770 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 KLRB1Q12918 225 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 TRAF3Q13114 568 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 ABRAXAS2Q15018 415 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 PRR30Q53SZ7 412 aaPredicted RBP16.81■□□□□ 0.28
CLK4-211ENST00000522556 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 ABHD17CQ6PCB6 329 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 SH2D5Q6ZV89 423 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 HUS1BQ8NHY5 278 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 PSMF1Q92530 271 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 OR1F2PQ96R84 312 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 MTERF1Q99551 399 aaKnown RBP16.81■□□□□ 0.28
CLK4-211ENST00000522556 PITHD1Q9GZP4 211 aaPredicted RBP16.81■□□□□ 0.28
CLK4-211ENST00000522556 ZNF700Q9H0M5 742 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 OR51B5Q9H339 312 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 NOL11Q9H8H0 719 aaKnown RBP16.81■□□□□ 0.28
CLK4-211ENST00000522556 ACTR8Q9H981 624 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 PRDM7Q9NQW5 492 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 ZNF451Q9Y4E5 1061 aa16.81■□□□□ 0.28
CLK4-211ENST00000522556 URADA6NGE7 173 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 STX16-NPEPL1H3BU86 382 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 STX16O14662 325 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 DLX3O60479 287 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 SMIM24O75264 130 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 ETHE1O95571 254 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 PRR35P0CG20 571 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 ITGAMP11215 1152 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 GSTM2P28161 218 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 CASRP41180 1078 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 NEK2P51955 445 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 CDH13P55290 713 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 LAPTM5Q13571 262 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 CPSF6Q16630 551 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLK4-211ENST00000522556 LGSNQ5TDP6 509 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 B3GNTL1Q67FW5 361 aaPredicted RBP16.8■□□□□ 0.28
CLK4-211ENST00000522556 NDUFAF7Q7L592 441 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 CPEB2Q7Z5Q1 589 aaKnown RBP16.8■□□□□ 0.28
CLK4-211ENST00000522556 SIRT6Q8N6T7 355 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 FAM47BQ8NA70 645 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 TEX19Q8NA77 164 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 Q8NA96 180 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 BRIX1Q8TDN6 353 aaKnown RBP16.8■□□□□ 0.28
CLK4-211ENST00000522556 IMMP1LQ96LU5 166 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 SEMA4BQ9NPR2 832 aaPredicted RBP16.8■□□□□ 0.28
CLK4-211ENST00000522556 DMRT3Q9NQL9 472 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 NECTIN3Q9NQS3 549 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 CLDN16Q9Y5I7 305 aa16.8■□□□□ 0.28
CLK4-211ENST00000522556 RNH1P13489 461 aaKnown RBP16.79■□□□□ 0.28
CLK4-211ENST00000522556 ST13P50502 369 aaKnown RBP16.79■□□□□ 0.28
CLK4-211ENST00000522556 MLLT10P55197 1068 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 RPS13P62277 151 aaKnown RBP16.79■□□□□ 0.28
CLK4-211ENST00000522556 ZRSR2Q15696 482 aaKnown RBP16.79■□□□□ 0.28
CLK4-211ENST00000522556 SFT2D3Q587I9 215 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 SLC6A19Q695T7 634 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 TRIM40Q6P9F5 258 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 ATG14Q6ZNE5 492 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 ZNF483Q8TF39 744 aaPredicted RBP16.79■□□□□ 0.28
CLK4-211ENST00000522556 TMEM237Q96Q45 408 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 LHPPQ9H008 270 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 RIC8BQ9NVN3 520 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 ANAPC2Q9UJX6 822 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 ZNF225Q9UK10 706 aa16.79■□□□□ 0.28
CLK4-211ENST00000522556 TNPO3Q9Y5L0 923 aaKnown RBP16.79■□□□□ 0.28
CLK4-211ENST00000522556 IGKV3D-11A0A0A0MRZ8 115 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 MYOCOSA0A1B0GUC4 107 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 MAGEB17A8MXT2 336 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 SORBS2O94875 1100 aaKnown RBP16.78■□□□□ 0.28
CLK4-211ENST00000522556 PPP2R1BP30154 601 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 NSDHLQ15738 373 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 HIST2H2ACQ16777 129 aaPredicted RBP16.78■□□□□ 0.28
CLK4-211ENST00000522556 UNC50Q53HI1 259 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 LIPJQ5W064 366 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 HIST2H2AA3Q6FI13 130 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 JMJD6Q6NYC1 403 aaPredicted RBP16.78■□□□□ 0.28
CLK4-211ENST00000522556 LETMD1Q6P1Q0 360 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 LINC00696Q6ZRV3 163 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 TDRPQ86YL5 185 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 L3MBTL4Q8NA19 623 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 PLPP5Q8NEB5 264 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 WDR20Q8TBZ3 569 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 METTL21AQ8WXB1 218 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 SEC16BQ96JE7 1060 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 FAR2Q96K12 515 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 PTCHD1Q96NR3 888 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 MAPKAP1Q9BPZ7 522 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 PRM3Q9NNZ6 103 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 PTGFRNQ9P2B2 879 aa16.78■□□□□ 0.28
CLK4-211ENST00000522556 B3GALT2O43825 422 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 F10P00742 488 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 ATP5A1P25705 553 aaKnown RBP16.77■□□□□ 0.28
CLK4-211ENST00000522556 ARL1P40616 181 aaPredicted RBP16.77■□□□□ 0.28
CLK4-211ENST00000522556 MTTPP55157 894 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 LIM2P55344 173 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 RAB38P57729 211 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 SKP1P63208 163 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 IGFBP7Q16270 282 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 TCHHL1Q5QJ38 904 aaPredicted RBP16.77■□□□□ 0.28
CLK4-211ENST00000522556 KHDRBS2Q5VWX1 349 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms