RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SUSD1Q6UWL2 747 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 LINGO2Q7L985 606 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 CHST4Q8NCG5 386 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 SCAMP4Q969E2 229 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 TMEM80Q96HE8 168 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 C3orf30Q96M34 536 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 MGME1Q9BQP7 344 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 SRRDQ9UH36 339 aa13.33□□□□□ -0.28
SYNPO-205ENST00000522122 SLC1A7O00341 560 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 MID1O15344 667 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 YES1P07947 543 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ALDOCP09972 364 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RPP38P78345 283 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ASB18Q6ZVZ8 466 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RIPOR3Q96MK2 946 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 TRIM2Q9C040 744 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 CARS2Q9HA77 564 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RHCGQ9UBD6 479 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 B3GNT3Q9Y2A9 372 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 PRRC2BQ5JSZ5 2229 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 MMP20O60882 483 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RCBTB2O95199 551 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 CH25HO95992 272 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RCAN2Q14206 197 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 PAGE3Q5JUK9 113 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 TMEM236Q5W0B7 351 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ENPP6Q6UWR7 440 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ANKRD13BQ86YJ7 626 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 BARD1Q99728 777 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 TSSK6Q9BXA6 273 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 GPR62Q9BZJ7 368 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF224Q9NZL3 707 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 GREB1LQ9C091 1923 aaPredicted RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 OR6C70A6NIJ9 312 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 WASH4PA8MWX3 477 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 GNB5O14775 395 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 GMFGO60234 142 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 KRT33AO76009 404 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 GSTT2BP0CG30 244 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ACRP10323 421 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ADH5P11766 374 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 PHC1P78364 1004 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 DCDC5Q6ZRR9 648 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 FUBP1Q96AE4 644 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 NDUFS4O43181 175 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 C1QAP02745 245 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RPS17P08708 135 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RPL10P27635 214 aaKnown RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 CCND3P30281 292 aaPredicted RBP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 HMGCLP35914 325 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 SMCO1Q147U7 214 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 PCBP2Q15366 365 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF181Q2M3W8 571 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 NHSL2Q5HYW2 709 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 MARCH8Q5T0T0 291 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 DCUN1D3Q8IWE4 304 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 KCT2Q8NC54 265 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 RAB8BQ92930 207 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 GAL3ST4Q96RP7 486 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 DOHHQ9BU89 302 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 TAS2R9Q9NYW1 312 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 ERVK-18Q9QC07 812 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 AASSQ9UDR5 926 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 SEC14L4Q9UDX3 406 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 GPR45Q9Y5Y3 372 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 WNT6Q9Y6F9 365 aa13.32□□□□□ -0.28
SYNPO-205ENST00000522122 THSD7AQ9UPZ6 1657 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 A0A1W2PQ72 361 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ENTPD6O75354 484 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF45Q02386 682 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 RBBP4Q09028 425 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SLITRK4Q8IW52 837 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 DUS3LQ96G46 650 aaKnown RBP13.31□□□□□ -0.28
SYNPO-205ENST00000522122 MS4A12Q9NXJ0 267 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SARDHQ9UL12 918 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF879B4DU55 563 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 CCRL2O00421 344 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SOCS7O14512 581 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 PEPDP12955 493 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ACRV1P26436 265 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 MAP2K4P45985 399 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SEC13P55735 322 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SMU1Q2TAY7 513 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 LY6G5CQ5SRR4 150 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF675Q8TD23 568 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 LGALS12Q96DT0 336 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ARNT2Q9HBZ2 717 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ENPP5Q9UJA9 477 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ISPDA4D126 451 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 MT-ND2P03891 347 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SOD2P04179 222 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 CLDN8P56748 225 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms