RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 B3GALT4O96024 378 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 NTRK1P04629 796 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 PRR35P0CG20 571 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 ZNF28P17035 718 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 HIST1H1TP22492 207 aaPredicted RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 ATP5A1P25705 553 aaKnown RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 EPHA3P29320 983 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 RBMS1P29558 406 aaKnown RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 SSR2P43308 183 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 RTP5Q14D33 572 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 KIAA0040Q15053 153 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 GALNTL6Q49A17 601 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 GALNT18Q6P9A2 607 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 ZNF793Q6ZN11 406 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 PRSS41Q7RTY9 318 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 CPLX4Q7Z7G2 160 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 PDSS2Q86YH6 399 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 ZCCHC7Q8N3Z6 543 aaKnown RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 SLC38A9Q8NBW4 561 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 OR9A4Q8NGU2 314 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 ACTRT2Q8TDY3 377 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 LRFN5Q96NI6 719 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 SERINC2Q96SA4 455 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 SORBS1Q9BX66 1292 aaKnown RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 EPN3Q9H201 632 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 CLK4Q9HAZ1 481 aaKnown RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 KLHL14Q9P2G3 628 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 NDOR1Q9UHB4 597 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 DCTN4Q9UJW0 460 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 KLK13Q9UKR3 277 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 WASF3Q9UPY6 502 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 TMED5Q9Y3A6 229 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 NAALAD2Q9Y3Q0 740 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 PCDHGA7Q9Y5G6 932 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 GOLGA8QA0A0J9YX86 632 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 GOLGA8OA6NCC3 632 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 GOLGA8NF8WBI6 632 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 EEDO75530 441 aaKnown RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 STK17BO94768 372 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 MYO1DO94832 1006 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 LBPP18428 481 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 TPP2P29144 1249 aaPredicted RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 RORAP35398 523 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 RAE1P78406 368 aaKnown RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 EMX2Q04743 252 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 MAD2L1Q13257 205 aaPredicted RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 COL9A2Q14055 689 aaPredicted RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 RFTN2Q52LD8 501 aaPredicted RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 ACAD11Q709F0 780 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 DTWD1Q8N5C7 304 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 ACOT4Q8N9L9 421 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 FNDC5Q8NAU1 212 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 CEP70Q8NHQ1 597 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 MMABQ96EY8 250 aaPredicted RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 FCRL1Q96LA6 429 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 GBP5Q96PP8 586 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 EBF4Q9BQW3 602 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 NPLQ9BXD5 320 aaPredicted RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 SPRY4Q9C004 299 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 GIMAP2Q9UG22 337 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 MCM8Q9UJA3 840 aa16.87■□□□□ 0.29
SDC2-205ENST00000520233 TMEM184BQ9Y519 407 aaPredicted RBP16.87■□□□□ 0.29
SDC2-205ENST00000520233 A0A0A6YYD5 115 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 A0A0G2JND7 137 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 CDRT15L2A8MXV6 281 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 SGK494L7N484 410 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 B3GALT2O43825 422 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 DXOO77932 396 aaKnown RBP16.86■□□□□ 0.29
SDC2-205ENST00000520233 DLGAP3O95886 979 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 KLK1P06870 262 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 ACPPP15309 386 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 CERS1P27544 350 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 TIA1P31483 386 aaKnown RBP eCLIP16.86■□□□□ 0.29
SDC2-205ENST00000520233 RPL38P63173 70 aaKnown RBP16.86■□□□□ 0.29
SDC2-205ENST00000520233 ABHD18Q0P651 414 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 CCNYL2Q5T2Q4 361 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 C1orf189Q5VU69 101 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 ZNF385CQ66K41 422 aaPredicted RBP16.86■□□□□ 0.29
SDC2-205ENST00000520233 NXNQ6DKJ4 435 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 OGFOD2Q6N063 350 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 NOXRED1Q6NXP6 359 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 PARP9Q8IXQ6 854 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 AMER3Q8N944 861 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 OR52B2Q96RD2 323 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 DPH2Q9BQC3 489 aaPredicted RBP16.86■□□□□ 0.29
SDC2-205ENST00000520233 CCDC28BQ9BUN5 200 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 SCNM1Q9BWG6 230 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 TMEM120AQ9BXJ8 343 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 FAM107BQ9H098 131 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 ZNF304Q9HCX3 659 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 TCF7L2Q9NQB0 619 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 FOXJ2Q9P0K8 574 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 NEUROG3Q9Y4Z2 214 aa16.86■□□□□ 0.29
SDC2-205ENST00000520233 KIF26BQ2KJY2 2108 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 ARHGAP10A1A4S6 786 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 MEN1O00255 615 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 PCDH7O60245 1069 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 RDH16O75452 317 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 ONECUT2O95948 504 aa16.85■□□□□ 0.29
SDC2-205ENST00000520233 KLK3P07288 261 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms