RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NT5DC2Q9H857 520 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 POPDC3Q9HBV1 291 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 GPAMQ9HCL2 828 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 NSMCE4AQ9NXX6 385 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 SUCOQ9UBS9 1254 aaKnown RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 CLDN16Q9Y5I7 305 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 CSMD1Q96PZ7 3565 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 NPIPA5E9PKD4 350 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 PSMD12O00232 456 aaPredicted RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 ASNA1O43681 348 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 NME2P1O60361 137 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 WDR47O94967 919 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 NME2P22392 152 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 SSTR1P30872 391 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 HNRNPH1P31943 449 aaKnown RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 GGT5P36269 586 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 PAFAH1B1P43034 410 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 CYB561P49447 251 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 HLCSP50747 726 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 GPR143P51810 404 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 STXBP1P61764 594 aaKnown RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 ADORA2A-AS1P86434 159 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 POU4F1Q01851 419 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 TGFBIQ15582 683 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 MAPKAPK3Q16644 382 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 MTFR2Q6P444 385 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 TMIGD1Q6UXZ0 262 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 RPTNQ6XPR3 784 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 CHERPQ8IWX8 916 aaKnown RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 SCUBE1Q8IWY4 988 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 SRRM1Q8IYB3 904 aaKnown RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 APCDD1LQ8NCL9 501 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 GAL3ST3Q96A11 431 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 MS4A6EQ96DS6 147 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 QRFPRQ96P65 431 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 NPLQ9BXD5 320 aaPredicted RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 DEFB126Q9BYW3 111 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 CAB39LQ9H9S4 337 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 RNF14Q9UBS8 474 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 TINAGQ9UJW2 476 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 ZNF490Q9ULM2 529 aaPredicted RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 NPIPA1Q9UND3 350 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 PPIEQ9UNP9 301 aaKnown RBP11.63□□□□□ -0.55
CSMD1-205ENST00000519623 MMACHCQ9Y4U1 282 aa11.63□□□□□ -0.55
CSMD1-205ENST00000519623 A0A0G2JN53 185 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 NCF1BA6NI72 391 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ENO4A6NNW6 628 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 NCF1CA8MVU1 366 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 TGFBR3LH3BV60 316 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ZNHIT1O43257 154 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 SLC25A12O75746 678 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 C1QAP02745 245 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 CCDC166P0CW27 439 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 NCF1P14598 390 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 HTR1EP28566 365 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 KCNC1P48547 511 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 HNRNPFP52597 415 aaKnown RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 CASP6P55212 293 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ILF2Q12905 390 aaKnown RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 SLBPQ14493 270 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ZNF630Q2M218 657 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ADPRMQ3LIE5 342 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 CDKL4Q5MAI5 379 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 XKRXQ6PP77 449 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 BNC2Q6ZN30 1099 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 CAPN12Q6ZSI9 719 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 FRA10AC1Q70Z53 315 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 CYS1Q717R9 158 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 VN1R5Q7Z5H4 357 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 TMEM52Q8NDY8 209 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ARMC2Q8NEN0 867 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 B3GNT7Q8NFL0 401 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 TTLQ8NG68 377 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 PYROXD1Q8WU10 500 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ESAMQ96AP7 390 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 SEC16BQ96JE7 1060 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 FAR2Q96K12 515 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ERP44Q9BS26 406 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 TMEM79Q9BSE2 394 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 CAPS2Q9BXY5 557 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 PITHD1Q9GZP4 211 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 GPRC5BQ9NZH0 403 aa11.62□□□□□ -0.55
CSMD1-205ENST00000519623 ZNF223Q9UK11 482 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-205ENST00000519623 PDZD2O15018 2839 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 CYR61O00622 381 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 PHGDHO43175 533 aaKnown RBP11.61□□□□□ -0.55
CSMD1-205ENST00000519623 ERI3O43414 337 aaKnown RBP11.61□□□□□ -0.55
CSMD1-205ENST00000519623 CLEC3AO75596 197 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 MYO1DO94832 1006 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 MLYCDO95822 493 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 CD1DP15813 335 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 AGAP20933 346 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 GSTM2P28161 218 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 TNFRSF8P28908 595 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 PPP2R1BP30154 601 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 CLCN2P51788 898 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 HSD17B7P56937 341 aa11.61□□□□□ -0.55
CSMD1-205ENST00000519623 CDSNQ15517 529 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms