RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 MAGEA5P43359 124 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 TBPL1P62380 186 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 PPP2R2BQ00005 443 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 PLGLB1Q02325 96 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 FOXO1Q12778 655 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 KCNJ11Q14654 390 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 HSPB2Q16082 182 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 KLHL38Q2WGJ6 581 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 WLSQ5T9L3 541 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 RNF187Q5TA31 235 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 POMZP3Q6PJE2 187 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 PRSS57Q6UWY2 283 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 SEM1Q6ZVN7 128 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 SLC26A11Q86WA9 606 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 SYCE1Q8N0S2 351 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 CIARTQ8N365 385 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 FBXW8Q8N3Y1 598 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 UBL4BQ8N7F7 174 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 NAXEQ8NCW5 288 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 C1orf54Q8WWF1 131 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 SMPDL3BQ92485 455 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 SARAFQ96BY9 339 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 VMP1Q96GC9 406 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 CCDC138Q96M89 665 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 MACROD1Q9BQ69 325 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 CLK4Q9HAZ1 481 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 IL1RL2Q9HB29 575 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 CCDC177Q9NQR7 707 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 KCMF1Q9P0J7 381 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 MTRF1LQ9UGC7 380 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 TSR3Q9UJK0 312 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 YARS2Q9Y2Z4 477 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 KIAA1549Q9HCM3 1950 aa7.79□□□□□ -1.16
CTNNA1-215ENST00000519309 FREM3P0C091 2139 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 TUBAL3A6NHL2 446 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 A8MVJ9 347 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 GFYI3L273 518 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 CHST10O43529 356 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 NDUFS3O75489 264 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ALOX12P18054 663 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 MAOAP21397 527 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ARNTP27540 789 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 CEACAM8P31997 349 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 MAN2A2P49641 1150 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 GPR143P51810 404 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 CCZ1BP86790 482 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 CCZ1P86791 482 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 SNX1Q13596 522 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 BBS9Q3SYG4 887 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ACSBG2Q5FVE4 666 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 THEMIS2Q5TEJ8 643 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 CAPN13Q6MZZ7 669 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 PPP1R21Q6ZMI0 780 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 KIF18BQ86Y91 864 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 REXO1L1PQ8IX06 675 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 RNF10Q8N5U6 811 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 GOLM1Q8NBJ4 401 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 MFSD9Q8NBP5 474 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ZNF740Q8NDX6 193 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 PPHLN1Q8NEY8 458 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 GIMAP7Q8NHV1 300 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 SLC13A3Q8WWT9 602 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ASB11Q8WXH4 323 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ZNF592Q92610 1267 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 PTCHD1Q96NR3 888 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 FAM173AQ9BQD7 235 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 BDH2Q9BUT1 245 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 PCBD2Q9H0N5 130 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ETNK1Q9HBU6 452 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 LZTFL1Q9NQ48 299 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 PRDM9Q9NQV7 894 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 HPF1Q9NWY4 346 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 KLHL42Q9P2K6 505 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 SPRR3Q9UBC9 169 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ZNF629Q9UEG4 869 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 TRPS1Q9UHF7 1281 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 ERVK-11Q9UQG0 969 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 SH2B3Q9UQQ2 575 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 MMACHCQ9Y4U1 282 aa7.78□□□□□ -1.16
CTNNA1-215ENST00000519309 SYNDIG1LA6NDD5 238 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 GOLGA6L9A6NEM1 432 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 PRKNO60260 465 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 LCMT2O60294 686 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 CEP104O60308 925 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 B4GALT2O60909 372 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 CRLF1O75462 422 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 OR2J2O76002 312 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 OR6B1O95007 311 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 CELA3AP09093 270 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 MPC1LP0DKB6 136 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 OGNP20774 298 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 BMP5P22003 454 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 TIMP3P35625 211 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 FDFT1P37268 417 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 CETN2P41208 172 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 SOX3P41225 446 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 CLCN7P51798 805 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 BTG2P78543 158 aa7.77□□□□□ -1.17
CTNNA1-215ENST00000519309 PWP1Q13610 501 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms