RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 HDAC7Q8WUI4 952 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MITD1Q8WV92 249 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NUDCD2Q8WVJ2 157 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC44A1Q8WWI5 657 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DNAAF4Q8WXU2 420 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR1E3Q8WZA6 343 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 STARD8Q92502 1023 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PIGBQ92521 554 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FCGR1BQ92637 280 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 AKAP1Q92667 903 aaKnown RBP eCLIP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HAS2Q92819 552 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 APBB2Q92870 758 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CELF1Q92879 486 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GLG1Q92896 1179 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 EMG1Q92979 244 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HIST1H2ACQ93077 130 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 P2RX5Q93086 422 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RFKQ969G6 155 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IGSF8Q969P0 613 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ST6GALNAC6Q969X2 333 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 AZIN2Q96A70 460 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ISG20Q96AZ6 181 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MOB3AQ96BX8 217 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HAVCR1Q96D42 359 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF183Q96D59 192 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 R3HDM4Q96D70 268 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OTUB1Q96FW1 271 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C16orf58Q96GQ5 468 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZC3HAV1LQ96H79 300 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OXNAD1Q96HP4 312 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KAZALD1Q96I82 304 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAGED4Q96JG8 741 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM71F1Q96KD3 344 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 EGLN2Q96KS0 407 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRMT6Q96LA8 375 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IFT74Q96LB3 600 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LURAP1Q96LR2 239 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRICKLE1Q96MT3 831 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA33Q96N06 139 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPR137Q96N19 417 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF583Q96ND8 569 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRFN5Q96NI6 719 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF570Q96NI8 536 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GUCD1Q96NT3 240 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKRD27Q96NW4 1050 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CATSPER2Q96P56 530 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPR78Q96P69 363 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 UHRF2Q96PU4 802 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 BTBD9Q96Q07 612 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRNT1Q96Q11 434 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR6C1Q96RD1 312 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TAAR6Q96RI8 345 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GFM1Q96RP9 751 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRR25Q96S07 402 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC22A12Q96S37 553 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RASL10BQ96S79 203 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF347Q96SE7 839 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF607Q96SK3 696 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACOX2Q99424 681 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PSMB7Q99436 277 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTERF1Q99551 399 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 COQ7Q99807 217 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CPNE1Q99829 537 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OMDQ99983 421 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 JPH2Q9BR39 696 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF559Q9BR84 538 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MXRA8Q9BRK3 442 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C11orf70Q9BRQ4 267 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CBWD1Q9BRT8 395 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 BTBD10Q9BSF8 475 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC25A33Q9BSK2 321 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PCGF1Q9BSM1 259 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ALKBH7Q9BT30 221 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM43Q9BTV4 400 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MSTO1Q9BUK6 570 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC94Q9BW85 323 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDK19Q9BWU1 502 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 QTRT1Q9BXR0 403 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPL13Q9BYD1 178 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PANK2Q9BZ23 570 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PITPNM3Q9BZ71 974 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NUF2Q9BZD4 464 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPL37Q9BZE1 423 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 B3GNT4Q9C0J1 378 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC7A5P2Q9GIP4 190 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPRTNQ9H040 489 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TKTL2Q9H0I9 626 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DNTTIP1Q9H147 329 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GANQ9H2C0 597 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNX25Q9H3E2 840 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CUEDC2Q9H467 287 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RAD21L1Q9H4I0 556 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACTL8Q9H568 366 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HAUS4Q9H6D7 363 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM231Q9H6L2 316 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SMYD3Q9H7B4 428 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 AUNIPQ9H7T9 357 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SYNDIG1Q9H7V2 258 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 METTL7AQ9H8H3 244 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C10orf88Q9H8K7 445 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms