RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 NXF3Q9H4D5 531 aaKnown RBP-0.3□□□□□ -2.46
SCARNA23-201ENST00000516060 Q9H8V8 135 aa-0.3□□□□□ -2.46
SCARNA23-201ENST00000516060 ZNF230Q9UIE0 474 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA23-201ENST00000516060 ZNF148Q9UQR1 794 aa-0.3□□□□□ -2.46
SCARNA23-201ENST00000516060 CMAHPQ9Y471 501 aa-0.3□□□□□ -2.46
SCARNA23-201ENST00000516060 MCF2LO15068 1137 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 NUDT21O43809 227 aaKnown RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 GJB5O95377 273 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 P0C880 135 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 KRT3P12035 628 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 RNH1P13489 461 aaKnown RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 ZP3P21754 424 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 EPHA8P29322 1005 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 ACVR1BP36896 505 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 RXRGP48443 463 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 SLC1A6P48664 564 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 RPL7AP62424 266 aaKnown RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 RPS27AP62979 156 aaKnown RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 ADARB1P78563 741 aaKnown RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 CD47Q08722 323 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 KRT33BQ14525 404 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 BAK1Q16611 211 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 ZNF630Q2M218 657 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 ZSCAN23Q3MJ62 389 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 SLC22A10Q63ZE4 541 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 CYB5D1Q6P9G0 228 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 INO80CQ6PI98 192 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 TBC1D10CQ8IV04 446 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 CCDC71Q8IV32 467 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 Q8N9G6 341 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 MDS2Q8NDY4 140 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 PHOSPHO2Q8TCD6 241 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 BLOC1S5Q8TDH9 187 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 SMARCD2Q92925 531 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 MARC2Q969Z3 335 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 NXPE2Q96DL1 559 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 FAM71F1Q96KD3 344 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 LINC00477Q96M19 166 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 NEK1Q96PY6 1258 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 BTBD9Q96Q07 612 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 IL12RB2Q99665 862 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 C19orf24Q9BVV8 132 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 PLK3Q9H4B4 646 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 FNDC4Q9H6D8 234 aaPredicted RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 TBC1D17Q9HA65 648 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 RRP7BPQ9NSQ0 103 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 IMPAD1Q9NX62 359 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 LARSQ9P2J5 1176 aaKnown RBP-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 HACL1Q9UJ83 578 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 PILRBQ9UKJ0 227 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 TBX21Q9UL17 535 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 NAALADL1Q9UQQ1 740 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 WDR83OSQ9Y284 106 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 SHANK1Q9Y566 2161 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 LRRK1Q38SD2 2015 aa-0.31□□□□□ -2.46
SCARNA23-201ENST00000516060 PARD3Q8TEW0 1356 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 FAT4Q6V0I7 4981 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 GSAPA4D1B5 854 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 EFCAB7A8K855 629 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 NBR2O15453 112 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 TSPAN1O60635 241 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 IGHV2-70P01814 119 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 DNTTP04053 509 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 MRPL3P09001 348 aaKnown RBP-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 LAMP1P11279 417 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 TRIM21P19474 475 aaKnown RBP-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 ACSL1P33121 698 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 LONP1P36776 959 aaKnown RBP-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 RPS9P46781 194 aaKnown RBP-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 ARL4CP56559 192 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 PEX3P56589 373 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 MADCAM1Q13477 382 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 PDE7AQ13946 482 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 IGFBP7Q16270 282 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 ZNF674Q2M3X9 581 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 ZNF528Q3MIS6 628 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 ABCA11PQ4W5N1 156 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 PAGE2BQ5JRK9 111 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 TATDN1Q6P1N9 297 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 PRSS55Q6UWB4 352 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 TOGARAM2Q6ZUX3 1019 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 Q6ZVQ6 151 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 MYLK4Q86YV6 388 aaPredicted RBP-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 MCEMP1Q8IX19 187 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 XXYLT1Q8NBI6 393 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 ZNF671Q8TAW3 534 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 POF1BQ8WVV4 589 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 SPATA17Q96L03 361 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 C1orf74Q96LT6 269 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 EHD1Q9H4M9 534 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 MIEF1Q9NQG6 463 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 ITM2CQ9NQX7 267 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 EXD2Q9NVH0 621 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 PDP2Q9P2J9 529 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 POLKQ9UBT6 870 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 TBX20Q9UMR3 447 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 HBS1LQ9Y450 684 aaKnown RBP-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 MAST4O15021 2626 aa-0.32□□□□□ -2.46
SCARNA23-201ENST00000516060 A0A096LNJ9 63 aa-0.33□□□□□ -2.46
SCARNA23-201ENST00000516060 NPIPB15A6NHN6 443 aaPredicted RBP-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms