RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C17orf53Q8N3J3 647 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-215ENST00000515516 TMEM178AQ8NBL3 297 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 FBXO25Q8TCJ0 367 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 ADAMTS18Q8TE60 1221 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 FBF1Q8TES7 1133 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 EXT2Q93063 718 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 KIAA1191Q96A73 305 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 PTCD3Q96EY7 689 aaKnown RBP12.82□□□□□ -0.36
TCOF1-215ENST00000515516 TMEM79Q9BSE2 394 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 EFCAB11Q9BUY7 163 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 DEFB126Q9BYW3 111 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 REXO4Q9GZR2 422 aaKnown RBP12.82□□□□□ -0.36
TCOF1-215ENST00000515516 COPS7BQ9H9Q2 264 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-215ENST00000515516 NMRAL1Q9HBL8 299 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 KLHL1Q9NR64 748 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 MMACHCQ9Y4U1 282 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 PCDHGB6Q9Y5F9 930 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 COL12A1Q99715 3063 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 ESPL1Q14674 2120 aa12.82□□□□□ -0.36
TCOF1-215ENST00000515516 NUP210LQ5VU65 1888 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 TRGV8A0A0C4DH27 118 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 A0A0G2JN53 185 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 TCRBV16S1A1N1A0A5B0 115 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 SAGE2PA6NJ88 616 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 A8MUA0 341 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 FCHO1O14526 889 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 WISP3O95389 354 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-215ENST00000515516 CLDN1O95832 211 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 TDGF1P3P51864 188 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 PLA2G16P53816 162 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 IRF8Q02556 426 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 SLC13A2Q13183 592 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 ZKSCAN8Q15776 578 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-215ENST00000515516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.81□□□□□ -0.369e-7■■□□□ 12.8
TCOF1-215ENST00000515516 FBXO48Q5FWF7 155 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 C1QL3Q5VWW1 255 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 SPINK14Q6IE38 97 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 FJX1Q86VR8 437 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 PDPRQ8NCN5 879 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 ELP5Q8TE02 316 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 UBE2E3Q969T4 207 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 UBXN10Q96LJ8 280 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 SIGLEC12Q96PQ1 595 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 ALG9Q9H6U8 611 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 NECTIN3Q9NQS3 549 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 PRTFDC1Q9NRG1 225 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 LRFN1Q9P244 771 aa12.81□□□□□ -0.36
TCOF1-215ENST00000515516 SUCOQ9UBS9 1254 aaKnown RBP12.81□□□□□ -0.36
TCOF1-215ENST00000515516 PTBP2Q9UKA9 531 aaKnown RBP12.81□□□□□ -0.36
TCOF1-215ENST00000515516 USP9XQ93008 2570 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-215ENST00000515516 USP9YO00507 2555 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-215ENST00000515516 SYNDIG1LA6NDD5 238 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 SUPT3HB4E1H0 165 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 SUPT3HO75486 399 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 FAM155BO75949 473 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 TFEBP19484 476 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 HNRNPH1P31943 449 aaKnown RBP12.8□□□□□ -0.36
TCOF1-215ENST00000515516 RAB38P57729 211 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 PMP22Q01453 160 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 ALDH6A1Q02252 535 aaKnown RBP12.8□□□□□ -0.36
TCOF1-215ENST00000515516 RUNX2Q13950 521 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 DOC2AQ14183 400 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 MAPKAPK3Q16644 382 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 SLC25A25Q6KCM7 469 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 C8orf74Q6P047 294 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 MTFR2Q6P444 385 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 CEP128Q6ZU80 1094 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 LRRC70Q7Z2Q7 622 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 CCDC91Q7Z6B0 441 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 KIF2BQ8N4N8 673 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 MDS2Q8NDY4 140 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 SRFBP1Q8NEF9 429 aaKnown RBP12.8□□□□□ -0.36
TCOF1-215ENST00000515516 OR2L5Q8NG80 312 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 ESAMQ96AP7 390 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 TMEM125Q96AQ2 219 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 SERINC2Q96SA4 455 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 CD244Q9BZW8 370 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 ROGDIQ9GZN7 287 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 PNO1Q9NRX1 252 aaKnown RBP12.8□□□□□ -0.36
TCOF1-215ENST00000515516 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 COPG2Q9UBF2 871 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 ACOT9Q9Y305 439 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 HEATR5BQ9P2D3 2071 aa12.8□□□□□ -0.36
TCOF1-215ENST00000515516 A0A087X1B8 175 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 IGKV3D-11A0A0A0MRZ8 115 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 SYCE1LA8MT33 242 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 C4orf51C9J302 202 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 MAN1A2O60476 641 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 MYO1DO94832 1006 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 SP1P08047 785 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 LTA4HP09960 611 aaKnown RBP12.79□□□□□ -0.36
TCOF1-215ENST00000515516 MST1P26927 711 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 COL8A1P27658 744 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 TPP2P29144 1249 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-215ENST00000515516 PHBP35232 272 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 KCNC1P48547 511 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 CYB561P49447 251 aa12.79□□□□□ -0.36
TCOF1-215ENST00000515516 ST13P50502 369 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms