RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ZNF28P17035 718 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 IL1RNP18510 177 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 HIST1H1TP22492 207 aaPredicted RBP19.9■□□□□ 0.78
LSM6-207ENST00000515311 ALAS2P22557 587 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 BSGP35613 385 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 SSR2P43308 183 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 AVPR1BP47901 424 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 SEC24CP53992 1094 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 AQP5P55064 265 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 MTTPP55157 894 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 BTN3A2P78410 334 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 SMU1Q2TAY7 513 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 ATP6AP1LQ52LC2 224 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 VWA5B1Q5TIE3 1220 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 GALNT18Q6P9A2 607 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 PRSS41Q7RTY9 318 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 COMMD6Q7Z4G1 85 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 ZCCHC7Q8N3Z6 543 aaKnown RBP19.9■□□□□ 0.78
LSM6-207ENST00000515311 C1orf52Q8N6N3 182 aaKnown RBP19.9■□□□□ 0.78
LSM6-207ENST00000515311 OR9A4Q8NGU2 314 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 NXPE2Q96DL1 559 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 APIPQ96GX9 242 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 PPP1R36Q96LQ0 422 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 GBP5Q96PP8 586 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 SCNM1Q9BWG6 230 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 SPRY4Q9C004 299 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 NSRP1Q9H0G5 558 aaKnown RBP19.9■□□□□ 0.78
LSM6-207ENST00000515311 FOXJ2Q9P0K8 574 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 TMED5Q9Y3A6 229 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 SCN3AQ9NY46 2000 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 CACNA1AO00555 2505 aa19.9■□□□□ 0.78
LSM6-207ENST00000515311 A0A0A6YYC8 382 aaPredicted RBP19.89■□□□□ 0.77
LSM6-207ENST00000515311 I3L1I5 382 aaPredicted RBP19.89■□□□□ 0.77
LSM6-207ENST00000515311 RTCAO00442 366 aaKnown RBP19.89■□□□□ 0.77
LSM6-207ENST00000515311 SEC22BO75396 215 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 DLGAP3O95886 979 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ONECUT2O95948 504 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ACPPP15309 386 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ATP5A1P25705 553 aaKnown RBP19.89■□□□□ 0.77
LSM6-207ENST00000515311 CD82P27701 267 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ABHD18Q0P651 414 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 KIAA0040Q15053 153 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 C6orf136Q5SQH8 315 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ZNF385CQ66K41 422 aaPredicted RBP19.89■□□□□ 0.77
LSM6-207ENST00000515311 CGB2Q6NT52 195 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ZNF793Q6ZN11 406 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ACOT4Q8N9L9 421 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ACTRT2Q8TDY3 377 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 FCRL1Q96LA6 429 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 NPLQ9BXD5 320 aaPredicted RBP19.89■□□□□ 0.77
LSM6-207ENST00000515311 AKTIPQ9H8T0 292 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 ASCL3Q9NQ33 180 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 NDOR1Q9UHB4 597 aa19.89■□□□□ 0.77
LSM6-207ENST00000515311 SDK2Q58EX2 2172 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 A0A0A6YYD5 115 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 A0A0G2JN53 185 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 B3GALT2O43825 422 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 DIAPH2O60879 1101 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 PEX11AO75192 247 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 ITGAXP20702 1163 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 EPHA3P29320 983 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 SLC5A2P31639 672 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 IDH3AP50213 366 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 DSG2Q14126 1118 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 MAP7Q14244 749 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 GALNTL6Q49A17 601 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 SLC9B1Q4ZJI4 515 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 LARP4Q71RC2 724 aaKnown RBP eCLIP19.88■□□□□ 0.774e-6■□□□□ 9.4
LSM6-207ENST00000515311 DSELQ8IZU8 1212 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 MMABQ96EY8 250 aaPredicted RBP19.88■□□□□ 0.77
LSM6-207ENST00000515311 SORBS1Q9BX66 1292 aaKnown RBP19.88■□□□□ 0.77
LSM6-207ENST00000515311 WDR55Q9H6Y2 383 aaPredicted RBP19.88■□□□□ 0.77
LSM6-207ENST00000515311 MCM8Q9UJA3 840 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 ACSL6Q9UKU0 697 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 MSRB2Q9Y3D2 182 aa19.88■□□□□ 0.77
LSM6-207ENST00000515311 TRABD2BA6NFA1 517 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.87■□□□□ 0.77
LSM6-207ENST00000515311 SGK494L7N484 410 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 MEN1O00255 615 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 RDH16O75452 317 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 EEDO75530 441 aaKnown RBP19.87■□□□□ 0.77
LSM6-207ENST00000515311 MYO1DO94832 1006 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 B3GALT4O96024 378 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 ADRB1P08588 477 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 DRD4P21917 467 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 CERS1P27544 350 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 TPP2P29144 1249 aaPredicted RBP19.87■□□□□ 0.77
LSM6-207ENST00000515311 TIA1P31483 386 aaKnown RBP eCLIP19.87■□□□□ 0.77
LSM6-207ENST00000515311 RAE1P78406 368 aaKnown RBP19.87■□□□□ 0.77
LSM6-207ENST00000515311 DCDP81605 110 aaKnown RBP19.87■□□□□ 0.77
LSM6-207ENST00000515311 MAD2L1Q13257 205 aaPredicted RBP19.87■□□□□ 0.77
LSM6-207ENST00000515311 NKAIN1Q4KMZ8 207 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 RFTN2Q52LD8 501 aaPredicted RBP19.87■□□□□ 0.77
LSM6-207ENST00000515311 C1orf189Q5VU69 101 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 OGFOD2Q6N063 350 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 ACAD11Q709F0 780 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 PARP9Q8IXQ6 854 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 DTWD1Q8N5C7 304 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 AMER3Q8N944 861 aa19.87■□□□□ 0.77
LSM6-207ENST00000515311 RFWD2Q8NHY2 731 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms