RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 H0YIV9 168 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 K7EM74 188 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 MASP2O00187 686 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 B3GALT2O43825 422 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 DPM1O60762 260 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 CDC123O75794 336 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 TUBBP07437 444 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 RPS17P08708 135 aaKnown RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 NUDT17P0C025 328 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 SBK3P0C264 359 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 COX6A1P12074 109 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 ATP5F1P24539 256 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 PIK3CBP42338 1070 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 CCT5P48643 541 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 MTTPP55157 894 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 AP2B1P63010 937 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 KLRB1Q12918 225 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 RAPSNQ13702 412 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 DDX39BQ13838 428 aaKnown RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 NSDHLQ15738 373 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 TMEM35AQ53FP2 167 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 ABHD17CQ6PCB6 329 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 PRICKLE2Q7Z3G6 844 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 CPEB2Q7Z5Q1 589 aaKnown RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 SLC22A9Q8IVM8 553 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 CA13Q8N1Q1 262 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 TMEM151AQ8N4L1 468 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 L3MBTL4Q8NA19 623 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 TEX19Q8NA77 164 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 ADAMTS18Q8TE60 1221 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 PPP4R1Q8TF05 950 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 THOC3Q96J01 351 aaKnown RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 QRFPRQ96P65 431 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 KCNC2Q96PR1 638 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 SERINC2Q96SA4 455 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 CENPKQ9BS16 269 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 TBCDQ9BTW9 1192 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 NTMT1Q9BV86 223 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 LHPPQ9H008 270 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 ZNF700Q9H0M5 742 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 ZNF160Q9HCG1 818 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-210ENST00000515198 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 RNF11Q9Y3C5 154 aa11.77□□□□□ -0.53
PTCD2-210ENST00000515198 COL6A6A6NMZ7 2263 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 OR7A17O14581 309 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 DLX3O60479 287 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 PRMT3O60678 531 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 B4GALT2O60909 372 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 DNAJB6O75190 326 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 SUPT7LO94864 414 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 OTCP00480 354 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 TGFB1P01137 390 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 PDGFAP04085 211 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ICAM2P13598 275 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 RAB38P57729 211 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 HERVK_113P63132 956 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 RHAGQ02094 409 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 RCN2Q14257 317 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ABRAXAS2Q15018 415 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 CPSF6Q16630 551 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ATG14Q6ZNE5 492 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 RIPOR1Q6ZS17 1223 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 LANCL3Q6ZV70 420 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 MILR1Q7Z6M3 343 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 KBTBD2Q8IY47 623 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 SHISA5Q8N114 240 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 CYP4X1Q8N118 509 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 OR52B6Q8NGF0 335 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 OR2W6PQ8NHA6 318 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ZNF483Q8TF39 744 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 TM9SF4Q92544 642 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 CCDC126Q96EE4 140 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 PTCHD1Q96NR3 888 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 NSUN5Q96P11 429 aaKnown RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 MTERF1Q99551 399 aaKnown RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 MESP1Q9BRJ9 268 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 TUBB6Q9BUF5 446 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 C1QTNF3Q9BXJ4 246 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ERVK-6Q9BXR3 956 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ROPN1BQ9BZX4 212 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ROPN1Q9HAT0 212 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-210ENST00000515198 ZBTB26Q9HCK0 441 aa11.76□□□□□ -0.53
PTCD2-210ENST00000515198 GRID1Q9ULK0 1009 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms