RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.41□□□□□ -0.585e-6■■■□□ 17.5
SNHG4-208ENST00000514110 ARMC10Q8N2F6 343 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 GHDCQ8N2G8 530 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 NKAPQ8N5F7 415 aaKnown RBP11.41□□□□□ -0.58
SNHG4-208ENST00000514110 APCDD1LQ8NCL9 501 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 AGAP11Q8TF27 550 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 ANKRD7Q92527 254 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 CAPZA3Q96KX2 299 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 EGFL8Q99944 293 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 DEFB126Q9BYW3 111 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 TRIM8Q9BZR9 551 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 ZNF223Q9UK11 482 aaPredicted RBP11.41□□□□□ -0.58
SNHG4-208ENST00000514110 OARD1Q9Y530 152 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 ASB1Q9Y576 335 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 CLDN16Q9Y5I7 305 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 KCNE2Q9Y6J6 123 aa11.41□□□□□ -0.58
SNHG4-208ENST00000514110 TRBV11-1A0A0K0K1C0 115 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 TGFBR3LH3BV60 316 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 FCHO1O14526 889 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 ADAM10O14672 748 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 ZSCAN12O43309 604 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 PIAS1O75925 651 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 MYO1DO94832 1006 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 WDR47O94967 919 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 SEC31AO94979 1220 aaKnown RBP11.4□□□□□ -0.58
SNHG4-208ENST00000514110 CLDN14O95500 239 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 C1GALT1C1LP0DN25 315 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 TCP1P17987 556 aaKnown RBP11.4□□□□□ -0.58
SNHG4-208ENST00000514110 HNRNPH1P31943 449 aaKnown RBP11.4□□□□□ -0.58
SNHG4-208ENST00000514110 PTGER1P34995 402 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 RFC3P40938 356 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 ARL4CP56559 192 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 SLBPQ14493 270 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNHG4-208ENST00000514110 SLCO4C1Q6ZQN7 724 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 SYDE1Q6ZW31 735 aaPredicted RBP11.4□□□□□ -0.58
SNHG4-208ENST00000514110 SCUBE1Q8IWY4 988 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 ZNF295-AS1Q8N0V1 137 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 TMEM52Q8NDY8 209 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 FBXO36Q8NEA4 188 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 ARMC2Q8NEN0 867 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 B3GNT7Q8NFL0 401 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 TMEM125Q96AQ2 219 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 RHBDF1Q96CC6 855 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 MTFMTQ96DP5 389 aaKnown RBP11.4□□□□□ -0.58
SNHG4-208ENST00000514110 PDLIM2Q96JY6 352 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 LURAP1Q96LR2 239 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 MCMBPQ9BTE3 642 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 GPAMQ9HCL2 828 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 MOCS1Q9NZB8 636 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 CTNNAL1Q9UBT7 734 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 MMACHCQ9Y4U1 282 aa11.4□□□□□ -0.58
SNHG4-208ENST00000514110 AKAP9Q99996 3911 aa11.4□□□□□ -0.59
SNHG4-208ENST00000514110 ADGRG4Q8IZF6 3080 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 LRIT2A6NDA9 550 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 NCF1BA6NI72 391 aaPredicted RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 USP27XA6NNY8 438 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 NCF1CA8MVU1 366 aaPredicted RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 ERI3O43414 337 aaKnown RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 H2AFYO75367 372 aaKnown RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 TACC2O95359 2948 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 TBX6O95947 436 aaPredicted RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 NCF1P14598 390 aaPredicted RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 GNAZP19086 355 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 PPP2R1BP30154 601 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 KIR3DL1P43629 444 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 SLC6A12P48065 614 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 HNMTP50135 292 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 MEOX1P50221 254 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 HNRNPFP52597 415 aaKnown RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 STXBP1P61764 594 aaKnown RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 PDIA2Q13087 525 aaKnown RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 TMIGD1Q6UXZ0 262 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 FRA10AC1Q70Z53 315 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 ADAMTSL2Q86TH1 951 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 CREG2Q8IUH2 290 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 SULF2Q8IWU5 870 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 KLHDC8AQ8IYD2 350 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 PIAS4Q8N2W9 510 aaPredicted RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 CCT6BQ92526 530 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 GAL3ST3Q96A11 431 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 MS4A6EQ96DS6 147 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 FAR2Q96K12 515 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 QRFPRQ96P65 431 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 DMRTA2Q96SC8 542 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 TRIM31Q9BZY9 425 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 PRTFDC1Q9NRG1 225 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 SMYD2Q9NRG4 433 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 PNO1Q9NRX1 252 aaKnown RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 FBXW2Q9UKT8 454 aa11.39□□□□□ -0.59
SNHG4-208ENST00000514110 KLF13Q9Y2Y9 288 aaPredicted RBP11.39□□□□□ -0.59
SNHG4-208ENST00000514110 E7ESA3 106 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 E9PLN8 166 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 TFECO14948 347 aaPredicted RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 TAPBPO15533 448 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 PEX1O43933 1283 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 HS6ST1O60243 411 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 PRKNO60260 465 aaPredicted RBP11.38□□□□□ -0.59
SNHG4-208ENST00000514110 PRAMEF4O60810 478 aa11.38□□□□□ -0.59
SNHG4-208ENST00000514110 ITGA10O75578 1167 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms