RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 BIRC5O15392 142 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 GALR3O60755 368 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 SKAP2O75563 359 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 CDC123O75794 336 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 NSA2O95478 260 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 HSPA4LO95757 839 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 GBAP04062 536 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 SERPINE1P05121 402 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ENO1P06733 434 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 PRKAR1AP10644 381 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 NR1D1P20393 614 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 AGXTP21549 392 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 GSTM2P28161 218 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 MAPK1P28482 360 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 SSR2P43308 183 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 AVPR1BP47901 424 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 EFNA3P52797 238 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 STXBP1P61764 594 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 PPP2R2AP63151 447 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 PHEXP78562 749 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 HMGCS1Q01581 520 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 TLE3Q04726 772 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 IL10RAQ13651 578 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ERV3-1Q14264 604 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ABRAXAS2Q15018 415 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ADPRMQ3LIE5 342 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 CRTC2Q53ET0 693 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 VWA2Q5GFL6 755 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 KHDRBS2Q5VWX1 349 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 TRIM40Q6P9F5 258 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ABHD17CQ6PCB6 329 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF517Q6ZMY9 492 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ABHD13Q7L211 337 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ZC3H7AQ8IWR0 971 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF781Q8N8C0 355 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 OR2L5Q8NG80 312 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 STARD8Q92502 1023 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 REPS1Q96D71 796 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 PEX11GQ96HA9 241 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 PPP1R36Q96LQ0 422 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 QRFPRQ96P65 431 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 CSF3RQ99062 836 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 MRPL1Q9BYD6 325 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 SLC29A3Q9BZD2 475 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ACTL8Q9H568 366 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 COPS7BQ9H9Q2 264 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 GPN3Q9UHW5 284 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 SNX6Q9UNH7 406 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 SLC12A4Q9UP95 1085 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 STK38LQ9Y2H1 464 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 PTRH2Q9Y3E5 179 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 LOC400499M0QZD8 3231 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ACACAQ13085 2346 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ACACBO00763 2458 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 TMEM8BA6NDV4 472 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 DYNC1I1O14576 645 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 AZIN1O14977 448 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 RRP8O43159 456 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 EFSO43281 561 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 EEDO75530 441 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 PRKRAO75569 313 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 KRT6AP02538 564 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 KRT6BP04259 564 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 JUNP05412 331 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SMIM10L1P0DMW3 83 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 PIK3CBP42338 1070 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 XCR1P46094 333 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SLC1A6P48664 564 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 KRT6CP48668 564 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 RAP1GDS1P52306 607 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 ABCE1P61221 599 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 FOXK2Q01167 660 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 BTKQ06187 659 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 STX3Q13277 289 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 FAM53BQ14153 422 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 HERC3Q15034 1050 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 NKG7Q16617 165 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 ST3GAL2Q16842 350 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SWI5Q1ZZU3 235 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 DEPDC1Q5TB30 811 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 MFSD4BQ5TF39 518 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 KANK2Q63ZY3 851 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 MRPL14Q6P1L8 145 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 PRMT9Q6P2P2 845 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 CA13Q8N1Q1 262 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 AMER2Q8N7J2 671 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 FAM47BQ8NA70 645 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 OR51Q1Q8NH59 317 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 STT3BQ8TCJ2 826 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 TWIST2Q8WVJ9 160 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 KIAA1143Q96AT1 154 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 CMTM7Q96FZ5 175 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SMIM10Q96HG1 83 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 FAR2Q96K12 515 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 CNDP1Q96KN2 507 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SORT1Q99523 831 aa9.27□□□□□ -0.93
TOPBP1-209ENST00000513818 SPSB2Q99619 263 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms