RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CCL21O00585 134 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SLC16A5O15375 505 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 TTI1O43156 1089 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SEC24DO94855 1032 aaPredicted RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 UNC5CO95185 931 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 F10P00742 488 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 CELA2AP08217 269 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 HIST1H2AGP0C0S8 130 aaPredicted RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 SLC35G6P0C7Q6 338 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 HIST1H2ADP20671 130 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 IMPA1P29218 277 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 CXCR5P32302 372 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 BCL6P41182 706 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SLC1A2P43004 574 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 XCR1P46094 333 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 KCNK10P57789 538 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 TAS2R50P59544 299 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 TBPL1P62380 186 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 MAT1AQ00266 395 aaKnown RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 ACTN3Q08043 901 aaPredicted RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 SP140Q13342 867 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 HERC3Q15034 1050 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SYT16Q17RD7 645 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 TSNAXIP1Q2TAA8 658 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 ZNF766Q5HY98 468 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 ACER2Q5QJU3 275 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 ZNF549Q6P9A3 640 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 CYHR1Q6ZMK1 362 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 PIWIL4Q7Z3Z4 852 aaKnown RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 PCGF5Q86SE9 256 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SRRM1Q8IYB3 904 aaKnown RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 LRRC56Q8IYG6 542 aaPredicted RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 CPNE9Q8IYJ1 553 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 MYO1HQ8N1T3 1032 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 ZNF808Q8N4W9 903 aaPredicted RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 TMEM178AQ8NBL3 297 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 OR51Q1Q8NH59 317 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 M1APQ8TC57 530 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 CD200R1Q8TD46 325 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SLC13A3Q8WWT9 602 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 KIRREL1Q96J84 757 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 PBKQ96KB5 322 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 HIST1H2AHQ96KK5 128 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SERPINB12Q96P63 405 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 LPAR4Q99677 370 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 HIST1H2AJQ99878 128 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 HAUS8Q9BT25 410 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 AARSD1Q9BTE6 412 aaKnown RBP6.77□□□□□ -1.33
USP46-208ENST00000512656 H2AFJQ9BTM1 129 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 TRIM54Q9BYV2 358 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 KCNK13Q9HB14 408 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 PARVBQ9HBI1 364 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 SLC22A7Q9Y694 548 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 MYO7BQ6PIF6 2116 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 MTORP42345 2549 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 HEATR5BQ9P2D3 2071 aa6.77□□□□□ -1.33
USP46-208ENST00000512656 PKDREJQ9NTG1 2253 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 PCNX1Q96RV3 2341 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 PDZD2O15018 2839 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 GOLGA6L10A0A0M3HER8 536 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 H3BS24 57 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 SGK494L7N484 410 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 HAUS5O94927 633 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 TTC4O95801 387 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 IL1RNP18510 177 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 PGAM1P18669 254 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 ELAVL4P26378 380 aaKnown RBP6.76□□□□□ -1.33
USP46-208ENST00000512656 PTGER4P35408 488 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 COILP38432 576 aaPredicted RBP6.76□□□□□ -1.33
USP46-208ENST00000512656 CA7P43166 264 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 MAGEA3P43357 314 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 ST13P50502 369 aaKnown RBP6.76□□□□□ -1.33
USP46-208ENST00000512656 CCR8P51685 355 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 SMSP52788 366 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 CSNK1G2P78368 415 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 MEF2AQ02078 507 aaPredicted RBP6.76□□□□□ -1.33
USP46-208ENST00000512656 NAE1Q13564 534 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 NSDHLQ15738 373 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 ZNF124Q15973 351 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 MEP1AQ16819 746 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 KRTCAP3Q53RY4 240 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 HSP90AA5PQ58FG0 334 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 ANKRD22Q5VYY1 191 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 CAPN13Q6MZZ7 669 aaPredicted RBP6.76□□□□□ -1.33
USP46-208ENST00000512656 CCDC137Q6PK04 289 aaKnown RBP6.76□□□□□ -1.33
USP46-208ENST00000512656 XKRXQ6PP77 449 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 AGTRAPQ6RW13 159 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 LCTLQ6UWM7 567 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 KIAA0408Q6ZU52 694 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 LANCL3Q6ZV70 420 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 VN1R4Q7Z5H5 301 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 ANKRD37Q7Z713 158 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 MRGPRGQ86SM5 289 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 ASPGQ86U10 573 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 MCEMP1Q8IX19 187 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 PPIL6Q8IXY8 311 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 RASGEF1CQ8N431 466 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 SLC5A8Q8N695 610 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 GPATCH11Q8N954 259 aa6.76□□□□□ -1.33
USP46-208ENST00000512656 FAM98AQ8NCA5 519 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms