RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 UFD1Q92890 307 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 SMG9Q9H0W8 520 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 H7C2Y5 167 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 SMAD9O15198 467 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 CBX6O95503 412 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 IFNA4P05014 189 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 RHOP08100 348 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 EIF2B2P49770 351 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 TARDBPQ13148 414 aaKnown RBP eCLIP8.63□□□□□ -1.03
VCAN-208ENST00000512590 TRIM28Q13263 835 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 UBAP2LQ14157 1087 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 GPR157Q5UAW9 335 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 SPNS3Q6ZMD2 512 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 VTCN1Q7Z7D3 282 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 METTL25Q8N6Q8 603 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 LIPHQ8WWY8 451 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 TFGQ92734 400 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 ZNF681Q96N22 645 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 ZFP3Q96NJ6 502 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 KIAA1456Q9P272 454 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 ACSL6Q9UKU0 697 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 GMEB1Q9Y692 573 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 FOXN1O15353 648 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 CREBL2O60519 120 aaPredicted RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 GSTP1P09211 210 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 CX3CR1P49238 355 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 F2RL1P55085 397 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 OLR1P78380 273 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 DPYSL3Q14195 570 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 PPA1Q15181 289 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 FSTL4Q6MZW2 842 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 ZFP1Q6P2D0 407 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 LSM14AQ8ND56 463 aaKnown RBP8.63□□□□□ -1.03
VCAN-208ENST00000512590 OR6C4Q8NGE1 309 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 OR6N2Q8NGY6 317 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 THAP6Q8TBB0 222 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 MSLNLQ96KJ4 702 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 HAO1Q9UJM8 370 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 DISP1Q96F81 1524 aa8.63□□□□□ -1.03
VCAN-208ENST00000512590 A0A1W2PQU0 124 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 APOC4-APOC2K7ER74 178 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SURF4O15260 269 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 GOSR1O95249 250 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 KCNK5O95279 499 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 APOC2P02655 101 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 LCATP04180 440 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CA3P07451 260 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 GLI1P08151 1106 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A6P0DMU7 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A5P0DMU8 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A7P0DMV0 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A8P0DMV1 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A9P0DMV2 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 GABRR1P24046 479 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 PKNOX1P55347 436 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 DSC2Q02487 901 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 DOC2AQ14183 400 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 GRK1Q15835 563 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CDKN3Q16667 212 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A2Q5DJT8 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A1Q5HYN5 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TCTE1Q5JU00 501 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 BAIAP2L2Q6UXY1 529 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ZCCHC23Q6ZST2 131 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TMEM110Q86TL2 294 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CPNE9Q8IYJ1 553 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 LILRB2Q8N423 598 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 FADS6Q8N9I5 356 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CT45A3Q8NHU0 189 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 NPLOC4Q8TAT6 608 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 WDR18Q9BV38 432 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CHIAQ9BZP6 476 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 KAT8Q9H7Z6 458 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 TM9SF3Q9HD45 589 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ZNF282Q9UDV7 671 aaPredicted RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 SARDHQ9UL12 918 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 A2ML1A8K2U0 1454 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 E7ENQ6 273 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 YKT6O15498 198 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SNAPC5O75971 98 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 TGFB1P01137 390 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 KDELR1P24390 212 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 BDKRB1P46663 353 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 KLK7P49862 253 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 CDH12P55289 794 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 PON3Q15166 354 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SLX4IPQ5VYV7 408 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 XKRXQ6PP77 449 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 GALNT5Q7Z7M9 940 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 SLITRK4Q8IW52 837 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ASCC1Q8N9N2 400 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 GALNT6Q8NCL4 622 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 OR1J2Q8NGS2 313 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ADAMTS18Q8TE60 1221 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ZNF473Q8WTR7 871 aaKnown RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 CIDECQ96AQ7 238 aaPredicted RBP8.62□□□□□ -1.03
VCAN-208ENST00000512590 NDUFA13Q9P0J0 144 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 ZNF860A6NHJ4 632 aa8.62□□□□□ -1.03
VCAN-208ENST00000512590 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms