RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 YTHDF3Q7Z739 585 aaKnown RBP5.5□□□□□ -1.53
RNF4-217ENST00000511892 ASPGQ86U10 573 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 KBTBD2Q8IY47 623 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 AFAP1L2Q8N4X5 818 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 CAMKVQ8NCB2 501 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 ZNF740Q8NDX6 193 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 ARMC2Q8NEN0 867 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 OR51Q1Q8NH59 317 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 DNAJB14Q8TBM8 379 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 BRIX1Q8TDN6 353 aaKnown RBP5.5□□□□□ -1.53
RNF4-217ENST00000511892 ACMSDQ8TDX5 336 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 PPP4R1Q8TF05 950 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 DCAKDQ8WVC6 231 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 ANKRD49Q8WVL7 239 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 DYDC1Q8WWB3 177 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 CKAP2Q8WWK9 683 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 SLC13A3Q8WWT9 602 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 TM9SF4Q92544 642 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 NEIL2Q969S2 332 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 HIST1H2AHQ96KK5 128 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 IMMP1LQ96LU5 166 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 LMF1Q96S06 567 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 CCT8L2Q96SF2 557 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 HIST1H2AJQ99878 128 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 WDR77Q9BQA1 342 aaPredicted RBP5.5□□□□□ -1.53
RNF4-217ENST00000511892 HAUS8Q9BT25 410 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 H2AFJQ9BTM1 129 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 VN1R1Q9GZP7 353 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 ZNF700Q9H0M5 742 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 SPNS1Q9H2V7 528 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 KCNK9Q9NPC2 374 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 C14orf105Q9NVL8 296 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 NSMCE4AQ9NXX6 385 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 PLA2G3Q9NZ20 509 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 HCN3Q9P1Z3 774 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 ZFATQ9P243 1243 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 MKL2Q9ULH7 1088 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 MTO1Q9Y2Z2 717 aaKnown RBP5.5□□□□□ -1.53
RNF4-217ENST00000511892 APCP25054 2843 aa5.5□□□□□ -1.53
RNF4-217ENST00000511892 ABCA12Q86UK0 2595 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 IGHV3-20A0A0C4DH32 117 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 TRBC2A0A5B9 178 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SLC35F4A4IF30 521 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 NPEPPSL1A6NEC2 478 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 PCDH17O14917 1159 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 NDUFS4O43181 175 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 OR1F1O43749 312 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 TYROBPO43914 113 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 RDH16O75452 317 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SEC24DO94855 1032 aaPredicted RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 F10P00742 488 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 FREM3P0C091 2139 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 C8orf89P0DMQ9 161 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SMIM10L1P0DMW3 83 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 ITGAMP11215 1152 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 GP1BBP13224 206 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SAT1P21673 171 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 DRD4P21917 467 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 CXCR2P25025 360 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 GRK3P35626 688 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 TSFMP43897 325 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 XCR1P46094 333 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SCTRP47872 440 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SLC6A12P48065 614 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 TNFSF10P50591 281 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 CCR8P51685 355 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 REEP5Q00765 189 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SLC18A2Q05940 514 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 MFAP5Q13361 173 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 PWP1Q13610 501 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 ZNF169Q14929 603 aaPredicted RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 TSNQ15631 228 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 KBTBD12Q3ZCT8 623 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 FHL5Q5TD97 284 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 GKAP1Q5VSY0 366 aaPredicted RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 IRAK1BP1Q5VVH5 260 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 B3GNTL1Q67FW5 361 aaPredicted RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 CAPN12Q6ZSI9 719 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 CPEB2Q7Z5Q1 589 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 ANKRD37Q7Z713 158 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 CPLX4Q7Z7G2 160 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 THOC6Q86W42 341 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 TRIM42Q8IWZ5 723 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 KLHDC8AQ8IYD2 350 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 NKAPQ8N5F7 415 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 SIRT6Q8N6T7 355 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 ANKS4BQ8N8V4 417 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 ANKRD53Q8N9V6 530 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 OR5T3Q8NGG3 340 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 ZCCHC10Q8TBK6 192 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 NT5CQ8TCD5 201 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 GRHL3Q8TE85 626 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 UTP15Q8TED0 518 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 CREB3L4Q8TEY5 395 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 ZNF473Q8WTR7 871 aaKnown RBP5.49□□□□□ -1.53
RNF4-217ENST00000511892 MZB1Q8WU39 189 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SLC5A11Q8WWX8 675 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 ATL1Q8WXF7 558 aa5.49□□□□□ -1.53
RNF4-217ENST00000511892 SMIM10Q96HG1 83 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms