RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 UQCRC1P31930 480 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 NAP1L1P55209 391 aaKnown RBP17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 SPA17Q15506 151 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 RNF187Q5TA31 235 aaPredicted RBP17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 PAOXQ6QHF9 649 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 UBE2R2Q712K3 238 aaPredicted RBP17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 SDCCAG8Q86SQ7 713 aaPredicted RBP17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 C17orf64Q86WR6 236 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 CILP2Q8IUL8 1156 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 CREB3L4Q8TEY5 395 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 TCF12Q99081 682 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 IL22Q9GZX6 179 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 AICDAQ9GZX7 198 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 PLEKHF2Q9H8W4 249 aa17.65■□□□□ 0.42
HMGCS1-206ENST00000511774 KDM4EB2RXH2 506 aaPredicted RBP17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 SYT5O00445 386 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 ZBTB14O43829 449 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 OR2J2O76002 312 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 FTCDO95954 541 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 NPPBP16860 134 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 OGNP20774 298 aaKnown RBP17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 SSR4P51571 173 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 CLCN2P51788 898 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 SNX1Q13596 522 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 ZNF750Q32MQ0 723 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 C1orf185Q5T7R7 199 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 IL20RBQ6UXL0 311 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 CPNE9Q8IYJ1 553 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 NAXEQ8NCW5 288 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 CD200R1Q8TD46 325 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 UTP15Q8TED0 518 aaKnown RBP17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 NCLNQ969V3 563 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 ALKBH8Q96BT7 664 aaKnown RBP17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 PDLIM2Q96JY6 352 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 PANX2Q96RD6 677 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 SGPP1Q9BX95 441 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 RHBGQ9H310 441 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 PRDM9Q9NQV7 894 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 SPRR3Q9UBC9 169 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 PPIEQ9UNP9 301 aaKnown RBP17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 ERVK-11Q9UQG0 969 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 PDE10AQ9Y233 779 aa17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 DRG1Q9Y295 367 aaKnown RBP17.64■□□□□ 0.41
HMGCS1-206ENST00000511774 BTNL10A8MVZ5 291 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 ZNF354AO60765 605 aaPredicted RBP17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 SOX3P41225 446 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 NPY2RP49146 381 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 FOXO1Q12778 655 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 NAE1Q13564 534 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 DAZAP2Q15038 168 aaPredicted RBP17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 AGTRAPQ6RW13 159 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 CCDC170Q8IYT3 715 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 CIARTQ8N365 385 aaPredicted RBP17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 FAM222BQ8WU58 562 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 NUDT8Q8WV74 236 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 GPR21Q99679 349 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 SARGQ9BW04 601 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 KLHL31Q9H511 634 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 SEMA4BQ9NPR2 832 aaPredicted RBP17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 EIF2B3Q9NR50 452 aaKnown RBP17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 AMFRQ9UKV5 643 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 ZNF148Q9UQR1 794 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 VPS9D1Q9Y2B5 631 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 YARS2Q9Y2Z4 477 aaKnown RBP17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 DHRS7Q9Y394 339 aa17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 ANK3Q12955 4377 aaKnown RBP17.63■□□□□ 0.41
HMGCS1-206ENST00000511774 A0A1W2PPR1 153 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 TCRBV7S3A2A0A539 114 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 A8MVJ9 347 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 ACOT7O00154 380 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 AQP7O14520 342 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 OR1F1O43749 312 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 SERPIND1P05546 499 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 WNT3P56703 355 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 RAB8AP61006 207 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 KEAP1Q14145 624 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 TTLL9Q3SXZ7 439 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 RIPPLY2Q5TAB7 128 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 KIAA0930Q6ICG6 404 aaPredicted RBP17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 POMZP3Q6PJE2 187 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 CXXC5Q7LFL8 322 aaKnown RBP17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 PEX26Q7Z412 305 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 SLC22A16Q86VW1 577 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 DENND6AQ8IWF6 608 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 ABHD11Q8NFV4 315 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 OR4K1Q8NGD4 311 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 OR4K3Q96R72 315 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 FAM129AQ9BZQ8 928 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 FBXO6Q9NRD1 293 aaPredicted RBP17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 PNO1Q9NRX1 252 aaKnown RBP17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 HPF1Q9NWY4 346 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 BFARQ9NZS9 450 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 ACAD8Q9UKU7 415 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 SOX13Q9UN79 622 aa17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 SONP18583 2426 aaKnown RBP17.62■□□□□ 0.41
HMGCS1-206ENST00000511774 ATP6AP2A0A1C7CYW4 349 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 WDR1O75083 606 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 ATP6AP2O75787 350 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 SMIM10L1P0DMW3 83 aa17.61■□□□□ 0.41
HMGCS1-206ENST00000511774 CD53P19397 219 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms