RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 B3GALT2O43825 422 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 DPM1O60762 260 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 CDC123O75794 336 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 TUBBP07437 444 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 RPS17P08708 135 aaKnown RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 NUDT17P0C025 328 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 SBK3P0C264 359 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 COX6A1P12074 109 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 ATP5F1P24539 256 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 PIK3CBP42338 1070 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 CCT5P48643 541 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 MTTPP55157 894 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 AP2B1P63010 937 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 KLRB1Q12918 225 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 RAPSNQ13702 412 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 DDX39BQ13838 428 aaKnown RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 NSDHLQ15738 373 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 TMEM35AQ53FP2 167 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 ABHD17CQ6PCB6 329 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 PRICKLE2Q7Z3G6 844 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 CPEB2Q7Z5Q1 589 aaKnown RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 SLC22A9Q8IVM8 553 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 CA13Q8N1Q1 262 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 TMEM151AQ8N4L1 468 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 L3MBTL4Q8NA19 623 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 TEX19Q8NA77 164 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 ADAMTS18Q8TE60 1221 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 PPP4R1Q8TF05 950 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 THOC3Q96J01 351 aaKnown RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 QRFPRQ96P65 431 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 KCNC2Q96PR1 638 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 SERINC2Q96SA4 455 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 CENPKQ9BS16 269 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 TBCDQ9BTW9 1192 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 NTMT1Q9BV86 223 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 LHPPQ9H008 270 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 ZNF700Q9H0M5 742 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 ZNF160Q9HCG1 818 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.53
PTCD2-209ENST00000511752 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 RNF11Q9Y3C5 154 aa11.77□□□□□ -0.53
PTCD2-209ENST00000511752 COL6A6A6NMZ7 2263 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 OR7A17O14581 309 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 DLX3O60479 287 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 PRMT3O60678 531 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 B4GALT2O60909 372 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 DNAJB6O75190 326 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 SUPT7LO94864 414 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 OTCP00480 354 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 TGFB1P01137 390 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 PDGFAP04085 211 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ICAM2P13598 275 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 RAB38P57729 211 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 HERVK_113P63132 956 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 RHAGQ02094 409 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 RCN2Q14257 317 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ABRAXAS2Q15018 415 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 CPSF6Q16630 551 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ATG14Q6ZNE5 492 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 RIPOR1Q6ZS17 1223 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 LANCL3Q6ZV70 420 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 MILR1Q7Z6M3 343 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 KBTBD2Q8IY47 623 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 SHISA5Q8N114 240 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 CYP4X1Q8N118 509 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 OR52B6Q8NGF0 335 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 OR2W6PQ8NHA6 318 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ZNF483Q8TF39 744 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 TM9SF4Q92544 642 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 CCDC126Q96EE4 140 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 PTCHD1Q96NR3 888 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 NSUN5Q96P11 429 aaKnown RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 MTERF1Q99551 399 aaKnown RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 MESP1Q9BRJ9 268 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 TUBB6Q9BUF5 446 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 C1QTNF3Q9BXJ4 246 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ERVK-6Q9BXR3 956 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ROPN1BQ9BZX4 212 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ROPN1Q9HAT0 212 aaPredicted RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 ZBTB26Q9HCK0 441 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 GRID1Q9ULK0 1009 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 MRPS33Q9Y291 106 aaKnown RBP11.76□□□□□ -0.53
PTCD2-209ENST00000511752 SCN2AQ99250 2005 aa11.76□□□□□ -0.53
PTCD2-209ENST00000511752 OR2W5A6NFC9 320 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms