RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ZNF483Q8TF39 744 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 ZNF473Q8WTR7 871 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 SLC39A7Q92504 469 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 TBC1D20Q96BZ9 403 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 L3HYPDHQ96EM0 354 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 CMTM7Q96FZ5 175 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 PEX11GQ96HA9 241 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 NSUN5Q96P11 429 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 BBC3Q96PG8 261 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 KCNC2Q96PR1 638 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 CDK15Q96Q40 435 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 OR1F2PQ96R84 312 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 F2RL3Q96RI0 385 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 SMC6Q96SB8 1091 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 CENPKQ9BS16 269 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 NPLQ9BXD5 320 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 ROGDIQ9GZN7 287 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 AICDAQ9GZX7 198 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 IQCGQ9H095 443 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 ZBTB26Q9HCK0 441 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 SEMA4BQ9NPR2 832 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 ATP13A2Q9NQ11 1180 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 MKS1Q9NXB0 559 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 PSD3Q9NYI0 1048 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 EMCNQ9ULC0 261 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 RNF11Q9Y3C5 154 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 HS3ST3B1Q9Y662 390 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 LOC400499M0QZD8 3231 aa6.76□□□□□ -1.33
PDLIM5-215ENST00000511586 DSPP15924 2871 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 A0A0G2JN53 185 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 G3V2L1 256 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 PSMD12O00232 456 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 PPP6CO00743 305 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 SOCS6O14544 535 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 B3GALT2O43825 422 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 DNAJB6O75190 326 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 ALOX12BO75342 701 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 JRKO75564 520 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 DNAJB5O75953 348 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TBX6O95947 436 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 FHP07954 510 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 ACPPP15309 386 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TSPAN8P19075 237 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 JAK1P23458 1154 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 PTX3P26022 381 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TSFMP43897 325 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 NAGLUP54802 743 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 MTTPP55157 894 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 DNAJB13P59910 316 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 NAA20P61599 178 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 OLR1P78380 273 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 CHAF1BQ13112 559 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TRAF3Q13114 568 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 AIMP2Q13155 320 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 DDX39BQ13838 428 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 RUNX2Q13950 521 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 ZRSR2Q15696 482 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 AP5B1Q2VPB7 878 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TUBB8Q3ZCM7 444 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 GGTA1PQ4G0N0 100 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 DCAF10Q5QP82 559 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 C10orf62Q5T681 223 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 DEPDC1Q5TB30 811 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 KHDRBS2Q5VWX1 349 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 FRG2Q64ET8 278 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 CPZQ66K79 652 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 FAAH2Q6GMR7 532 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 ABHD17CQ6PCB6 329 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TMEM205Q6UW68 189 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 KIRREL2Q6UWL6 708 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 RPS27LQ71UM5 84 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 CA13Q8N1Q1 262 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 BANPQ8N9N5 519 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 OR4F6Q8NGB9 312 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 OR11G2Q8NGC1 345 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 WDR20Q8TBZ3 569 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TRPC4APQ8TEL6 797 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 METTL21AQ8WXB1 218 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 RGMAQ96B86 450 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 PGM2Q96G03 612 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 ABHD17AQ96GS6 310 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 APOPT1Q96IL0 206 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 QRFPRQ96P65 431 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TMEM237Q96Q45 408 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 FRG2BQ96QU4 278 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 SERINC2Q96SA4 455 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 MTERF1Q99551 399 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TBCDQ9BTW9 1192 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 MS4A8Q9BY19 250 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 VN1R1Q9GZP7 353 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 SLC25A18Q9H1K4 315 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 OR51B5Q9H339 312 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 COPS7BQ9H9Q2 264 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 DMRT3Q9NQL9 472 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 PRDM7Q9NQW5 492 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 SENP1Q9P0U3 644 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 MID2Q9UJV3 735 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 FBXL4Q9UKA2 621 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 ADAM21Q9UKJ8 722 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms