RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SNX31Q8N9S9 440 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 MFSD9Q8NBP5 474 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 OR11G2Q8NGC1 345 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 PNPLA2Q96AD5 504 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 C8orf44Q96CB5 159 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 L3HYPDHQ96EM0 354 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 SMIM10Q96HG1 83 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 THOC3Q96J01 351 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 AGAP4Q96P64 663 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 KCNA7Q96RP8 456 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 SMAD5Q99717 465 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 GATA5Q9BWX5 397 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 C20orf27Q9GZN8 174 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF552Q9H707 407 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 NOL11Q9H8H0 719 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 PELI2Q9HAT8 420 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF160Q9HCG1 818 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 FARSBQ9NSD9 589 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 HCN3Q9P1Z3 774 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 MKL2Q9ULH7 1088 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 MAP4K5Q9Y4K4 846 aa8.27□□□□□ -1.09
PDLIM5-213ENST00000509357 SYCE1LA8MT33 242 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 IDSB3KWA1 339 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 H0YIG0 161 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 SGK494L7N484 410 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 RGS16O15492 202 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 NDUFS4O43181 175 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 H2AFYO75367 372 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 ERLIN1O75477 346 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 HPP00738 406 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 S100BP04271 92 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 IL1RNP18510 177 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 ATP5F1P24539 256 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 MAGOHP61326 146 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 HERVK_113P63132 956 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 SKP1P63208 163 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 RGS1Q08116 209 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 CHIT1Q13231 466 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 INPP5JQ15735 1006 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 SLC6A19Q695T7 634 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 TMEM214Q6NUQ4 689 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 KLC3Q6P597 504 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 LINC00696Q6ZRV3 163 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 NDUFAF7Q7L592 441 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 LCA5Q86VQ0 697 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 KBTBD2Q8IY47 623 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 LAS2Q8IYD9 372 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 AFAP1L2Q8N4X5 818 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 RBMXL3Q8N7X1 1067 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 L3MBTL4Q8NA19 623 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 OR4F6Q8NGB9 312 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 WDR20Q8TBZ3 569 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 TRPC4APQ8TEL6 797 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 CNDP1Q96KN2 507 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 AIF1LQ9BQI0 150 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 SORBS1Q9BX66 1292 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 ERVK-6Q9BXR3 956 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF717Q9BY31 904 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 SLC6A16Q9GZN6 736 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 LHPPQ9H008 270 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 EPS8L2Q9H6S3 715 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 IPPKQ9H8X2 491 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 SEMA4BQ9NPR2 832 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 OXSMQ9NWU1 459 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 GPRC5BQ9NZH0 403 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 OPTCQ9UBM4 332 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 DCDC2Q9UHG0 476 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 B3GNT3Q9Y2A9 372 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 KCNE2Q9Y6J6 123 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 MYO18BQ8IUG5 2567 aa8.26□□□□□ -1.09
PDLIM5-213ENST00000509357 TENM4Q6N022 2769 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 IGLV3-12A0A075B6K2 115 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 A0A0G2JN53 185 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 OR2W5A6NFC9 320 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 URADA6NGE7 173 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF860A6NHJ4 632 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 TMEM233B4DJY2 109 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ITM2AO43736 263 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 SH3BGRLO75368 114 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 RDH16O75452 317 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 OR4F21O95013 312 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 NSA2O95478 260 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 CHRNGP07510 517 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 C8orf89P0DMQ9 161 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 CHN1P15882 459 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 GNAZP19086 355 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 IMPDH1P20839 514 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 HNF4AP41235 474 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 XCR1P46094 333 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 NEK2P51955 445 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 NAGLUP54802 743 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 SOX8P57073 446 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 CLCQ05315 142 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ACTN3Q08043 901 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 PWP1Q13610 501 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 HERC3Q15034 1050 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 TBCCQ15814 346 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ADPRMQ3LIE5 342 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 PLEKHN1Q494U1 663 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 XKR6Q5GH73 641 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms