RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 LMO3Q8TAP4 145 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 SETD6Q8TBK2 473 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 PDCD6IPQ8WUM4 868 aaKnown RBP4.79□□□□□ -1.64
LINC01088-205ENST00000509088 NR4A3Q92570 626 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 SH3KBP1Q96B97 665 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 PHF21BQ96EK2 531 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 FEM1CQ96JP0 617 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 FAM20AQ96MK3 541 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 SORT1Q99523 831 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 TMEM246Q9BRR3 403 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 SF3B5Q9BWJ5 86 aaKnown RBP4.79□□□□□ -1.64
LINC01088-205ENST00000509088 NPLQ9BXD5 320 aaPredicted RBP4.79□□□□□ -1.64
LINC01088-205ENST00000509088 TEKT3Q9BXF9 490 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 ABCG4Q9H172 646 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 NIPAL2Q9H841 368 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 NANOGQ9H9S0 305 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 FANCFQ9NPI8 374 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 SLC25A10Q9UBX3 287 aaPredicted RBP4.79□□□□□ -1.64
LINC01088-205ENST00000509088 ZNF229Q9UJW7 825 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 RGPD1P0DJD0 1748 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 MARF1Q9Y4F3 1742 aaKnown RBP4.79□□□□□ -1.64
LINC01088-205ENST00000509088 ATRNO75882 1429 aa4.79□□□□□ -1.64
LINC01088-205ENST00000509088 IGSF1Q8N6C5 1336 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 TRAV6A0A075B6T7 132 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 PRSS51A0A1B0GVH4 220 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 A0A1W2PPW3 197 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 FAM170AA1A519 330 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 B4E171 279 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DNALI1O14645 258 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 TNPO2O14787 897 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 TFECO14948 347 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 STX7O15400 261 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 MRPS14O60783 128 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 BCAS2O75934 225 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DDAH2O95865 285 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 TBX18O95935 607 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 MBL2P11226 248 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ZNF26P17031 533 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 KLRC2P26717 231 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 GDI2P50395 445 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DNA2P51530 1060 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 NDST2P52849 883 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 MAPK12P53778 367 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 PEX3P56589 373 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DSCR9P59020 149 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DCDC1P59894 354 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 GSTO1P78417 241 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 GAD2Q05329 585 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 LGALS3BPQ08380 585 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 GPR68Q15743 365 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 FUT11Q495W5 492 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 IGSF11Q5DX21 431 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ZNF667Q5HYK9 610 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 RBM48Q5RL73 367 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 C6orf52Q5T4I8 152 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 GRTP1Q5TC63 336 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 FAM171A1Q5VUB5 890 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 NADSYN1Q6IA69 706 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ELP2Q6IA86 826 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ZNF773Q6PK81 442 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ARSKQ6UWY0 536 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 GSG1LQ6UXU4 331 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 MICU2Q8IYU8 434 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 CCDC185Q8N715 623 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 PLD5Q8N7P1 536 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ANKFN1Q8N957 763 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 BANPQ8N9N5 519 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ZNF680Q8NEM1 530 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 OR5H6Q8NGV6 325 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 OR6F1Q8NGZ6 308 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 VANGL1Q8TAA9 524 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DNAJA4Q8WW22 397 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 RAB40AQ8WXH6 277 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 PPWD1Q96BP3 646 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 LRRC39Q96DD0 335 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 QKIQ96PU8 341 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 CNPY3Q9BT09 278 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 DCUN1D5Q9BTE7 237 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 NUSAP1Q9BXS6 441 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 FRMD8P1Q9BZ68 369 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 NMUR2Q9GZQ4 415 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 NAPBQ9H115 298 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 MMP27Q9H306 513 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 SLC32A1Q9H598 525 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 EPHX3Q9H6B9 360 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 SYNDIG1Q9H7V2 258 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 TRIM45Q9H8W5 580 aaPredicted RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ERVMER34-1Q9H9K5 563 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 CAB39LQ9H9S4 337 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 JMJD4Q9H9V9 463 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 WDR6Q9NNW5 1121 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 TIGARQ9NQ88 270 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 SH3GLB2Q9NR46 395 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 SDHAF3Q9NRP4 125 aa4.78□□□□□ -1.64
LINC01088-205ENST00000509088 IARS2Q9NSE4 1012 aaKnown RBP4.78□□□□□ -1.64
LINC01088-205ENST00000509088 ACOXLQ9NUZ1 547 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms