RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 WDR20Q8TBZ3 569 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 ZNF483Q8TF39 744 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-220ENST00000508902 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLDND1-220ENST00000508902 SEC16BQ96JE7 1060 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 CSF3RQ99062 836 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 SORBS1Q9BX66 1292 aaKnown RBP17.11■□□□□ 0.33
CLDND1-220ENST00000508902 ZNF717Q9BY31 904 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-220ENST00000508902 ZNF700Q9H0M5 742 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 IPPKQ9H8X2 491 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 ATP13A2Q9NQ11 1180 aa17.11■□□□□ 0.33
CLDND1-220ENST00000508902 IGKV3D-11A0A0A0MRZ8 115 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 IQANK1A0A1B0GTG1 560 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 C8orf89P0DMQ9 161 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 GSTM2P28161 218 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 STXBP1P61764 594 aaKnown RBP17.1■□□□□ 0.33
CLDND1-220ENST00000508902 LAPTM5Q13571 262 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 VWA5B1Q5TIE3 1220 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 MED27Q6P2C8 311 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 TBC1D20Q96BZ9 403 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 TMEM237Q96Q45 408 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 OR1F2PQ96R84 312 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 C1QTNF3Q9BXJ4 246 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 REXO4Q9GZR2 422 aaKnown RBP17.1■□□□□ 0.33
CLDND1-220ENST00000508902 OR51B5Q9H339 312 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 NOL11Q9H8H0 719 aaKnown RBP17.1■□□□□ 0.33
CLDND1-220ENST00000508902 DMRT3Q9NQL9 472 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 NECTIN3Q9NQS3 549 aa17.1■□□□□ 0.33
CLDND1-220ENST00000508902 ANKDD1BA6NHY2 528 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 SAP18O00422 153 aaKnown RBP17.09■□□□□ 0.33
CLDND1-220ENST00000508902 SLC28A2O43868 658 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 B4GALT2O60909 372 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-220ENST00000508902 TGFB1P01137 390 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 NUDT17P0C025 328 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 PRR35P0CG20 571 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 PCNAP12004 261 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 ITGA3P26006 1051 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 SOX11P35716 441 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 CDH13P55290 713 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 RASA2Q15283 850 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 UNC50Q53HI1 259 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 PAGE2BQ5JRK9 111 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 MFSD4BQ5TF39 518 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 NDUFAF7Q7L592 441 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 PRICKLE2Q7Z3G6 844 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 PLPP5Q8NEB5 264 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 ACMSDQ8TDX5 336 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 CAVIN3Q969G5 261 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 LUZP4Q9P127 313 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 TSC22D4Q9Y3Q8 395 aa17.09■□□□□ 0.33
CLDND1-220ENST00000508902 NSG1A0A0A6YYJ2 146 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 MAGEB17A8MXT2 336 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 G3V2L1 256 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 H0YIV9 168 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 SORBS2O94875 1100 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 SCELO95171 688 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 ITGAMP11215 1152 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 MAOAP21397 527 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 NEK2P51955 445 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 RPS13P62277 151 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 KLRB1Q12918 225 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 DDX39BQ13838 428 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 ABRAXAS2Q15018 415 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 CPSF6Q16630 551 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 PRR30Q53SZ7 412 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 LIPJQ5W064 366 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 LETMD1Q6P1Q0 360 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 METTL2BQ6P1Q9 378 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 IGFL2Q6UWQ7 119 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 CPEB2Q7Z5Q1 589 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 ZNF605Q86T29 641 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 SCUBE1Q8IWY4 988 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 THOC3Q96J01 351 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 MTERF1Q99551 399 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 MFRPQ9BY79 579 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 PARD6BQ9BYG5 372 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 ACTR8Q9H981 624 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 SEMA4BQ9NPR2 832 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 KCMF1Q9P0J7 381 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 ZNF451Q9Y4E5 1061 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 ANGPTL3Q9Y5C1 460 aa17.08■□□□□ 0.32
CLDND1-220ENST00000508902 TNPO3Q9Y5L0 923 aaKnown RBP17.08■□□□□ 0.32
CLDND1-220ENST00000508902 URADA6NGE7 173 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 CYR61O00622 381 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 PLPP1O14494 284 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 UGDHO60701 494 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 SMIM24O75264 130 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 PROCP04070 461 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 CYC1P08574 325 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 RNH1P13489 461 aaKnown RBP17.07■□□□□ 0.32
CLDND1-220ENST00000508902 PPP2R1BP30154 601 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 CASRP41180 1078 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 LIM2P55344 173 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 ZRSR2Q15696 482 aaKnown RBP17.07■□□□□ 0.32
CLDND1-220ENST00000508902 SFT2D3Q587I9 215 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 TCHHL1Q5QJ38 904 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-220ENST00000508902 ZNF678Q5SXM1 525 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 DEPDC1Q5TB30 811 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms