RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 KRT84Q9NSB2 600 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 SLC6A13Q9NSD5 602 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 KIF17Q9P2E2 1029 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 RUVBL1Q9Y265 456 aaKnown RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 A3GALT2U3KPV4 340 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 U3KQV3 271 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 TRPM6Q9BX84 2022 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 MYO1GB0I1T2 1018 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 BOLA2-SMG1P6H3BVE0 249 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 FAM20BO75063 409 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ATP6V1G1O75348 118 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 POP7O75817 140 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 NADKO95544 446 aaPredicted RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 C1orf105O95561 183 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 C9P02748 559 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ABCB1P08183 1280 aaPredicted RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ENGP17813 658 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 IDUAP35475 653 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 UGT2B10P36537 528 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ASMTP46597 345 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ITGA1P56199 1179 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 IRF8Q02556 426 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 TEKQ02763 1124 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 PIGFQ07326 219 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 HIST2H2ACQ16777 129 aaPredicted RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 XKR6Q5GH73 641 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ADNP2Q6IQ32 1131 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 PNCKQ6P2M8 343 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 FAHD1Q6P587 224 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 NUDT18Q6ZVK8 323 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 SYT12Q8IV01 421 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 LACC1Q8IV20 430 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ZZZ3Q8IYH5 903 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 KLK6Q92876 244 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 TAMM41Q96BW9 452 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 COX14Q96I36 57 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 RIPOR3Q96MK2 946 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 FOPNLQ96NB1 174 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 TSSK3Q96PN8 268 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF300Q96RE9 604 aaPredicted RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ACOT13Q9NPJ3 140 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 MBNL1Q9NR56 388 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 PLCXD1Q9NUJ7 323 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 PDP1Q9P0J1 537 aaPredicted RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 PPT2Q9UMR5 302 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 OR1A2Q9Y585 309 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 PCDHGB3Q9Y5G1 929 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 DGKBQ9Y6T7 804 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 NUMA1Q14980 2115 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ISPDA4D126 451 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 SAGE2PA6NJ88 616 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 XPNPEP2O43895 674 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 EIF2S1P05198 315 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 GSNP06396 782 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 TACR1P25103 407 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 CD40LGP29965 261 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 HPCAL1P37235 193 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 MAPK9P45984 424 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 RPS3AP61247 264 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 CDK3Q00526 305 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 DOC2AQ14183 400 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 SIM2Q14190 667 aaPredicted RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ELOAQ14241 798 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 TEAD4Q15561 434 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ADPRMQ3LIE5 342 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ANXA8L1Q5VT79 327 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 UBE2UQ5VVX9 321 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 OR4F3Q6IEY1 312 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 OR2L2Q8NH16 312 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 DYNC2LI1Q8TCX1 351 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF480Q8WV37 535 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ATL1Q8WXF7 558 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 MYDGFQ969H8 173 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 APIPQ96GX9 242 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 APOLD1Q96LR9 279 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 MTERF1Q99551 399 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 ADPRHL2Q9NX46 363 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 SLC23A2Q9UGH3 650 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 BTNL2Q9UIR0 455 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 SAMHD1Q9Y3Z3 626 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 PCDHB11Q9Y5F2 797 aa10.57□□□□□ -0.72
SH3RF1-203ENST00000508685 E9PQ18 207 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 VEGFDO43915 354 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 MITFO75030 526 aaPredicted RBP10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 PAK4O96013 591 aaPredicted RBP10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 ADH1BP00325 375 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 C5AR1P21730 350 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 CD6P30203 668 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 FMO3P31513 532 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 CDKN2CP42773 168 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 PXNP49023 591 aaPredicted RBP10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 CCR3P51677 355 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 TBPL1P62380 186 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 NPRL3Q12980 569 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 TSTA3Q13630 321 aaPredicted RBP10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 HTR4Q13639 388 aa10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 DDX39BQ13838 428 aaKnown RBP10.56□□□□□ -0.72
SH3RF1-203ENST00000508685 FGL2Q14314 439 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms